ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGG
AATTCTAAAAATTCTACCAGAACTGTGTTTGCTTTCCAGAAATTTTCCAA
AAAAAGTTAGAAATCCTGTTAGAAAAACATTTTTGAAGACCTGGGTTTGC
TCTCCAGAGATCTGCAGATGGCTCAGCTCCTGGTAGAGAAGGACATCTAA
ACAAGGAAGGCCTAATCCTTTTTGCTAGCTCATTTCATGCAGACCAAAAG
TCCAGTTTATTATGTACATATCGATTCAGTTATTTATTACAGGTTCCCTT
TGGATTAACCTATGAATCAGCTTTATAATGTCTTTATTCTTAGGAGACAG
CAAGCACAATTTTTTTTGTTGTTTTGTTTTTATTTTTCTTATTAACATTG
CAAAAGAATTCAGAGATCTGTTTGCCTTTATAAACTTAGCTGGGTGGGAC
CTTTTCTTGAGATTACCATTCCAGCCAGAGTTTGACCTAAATTTGCTCTG
TACCAGGCTGACTAGGAATTTAAGAACCTGCCTGCATTTTTATCTGCCTA
TCTTTGGGTCTTTCCATCAAACTAGTTCATCGTGAAGCTGCCTCTGTTCC
TTTAGATCTGTGGAGCCCCTTATACAATTCATAATGTCATCCTGATATTT
TTGCATAGTTTTTTAAGCTTGTTTCCACAGCCTTAAGGGCTGTCCTAAAG
GCCTCAGCATTTACCATTTTGCTGAGACATTAACCACACTTTCTCCCTGC
CGA

NTTTTTTCGATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCAGCAGTGGGAGTGGG
TCATAAGCCCAGCTACAAAAGCTGAATCCTACAATCTGTCCTGTTGTAAT
ATGTGTCCAGGAAATGGTGGAACACAACCTGAAGAAGTAGTCACCAATGA
TTGTTCCAACAGGCAGTCTACTTCATGAGAGGTAGGCACTGTCTGGATAG
CCAAGAACCATATACTGGACACTCCATGGACTCAGAACAGAATAAAACAG
TGCTGGTAAAAGAAAATAAATAAATAATTTTTTTTATAAATAAATAAATA
AATAAATAAATAAATAAGCAAAATAGACATAAATAATGTAAAATACCTTA
TTATCAATGGACTCAATTCCCCAATAAAAAGACATAGGCTAACAGACTGG
TTACATAAACAGGACACAACATTTTGCTGCAAACAGGAAACCCACCTCAG
TGACAAAGACAGACACTACCTTAGAGTAAAAGGCTGGGAAATAATTTTCC
AACAAATTTTCCAAAGAAAGAACCTGGAGGAGCCATTCTAATATCGAGTA
AAATTGACTTGAACCTAATGTTATGAAAAATATAAGGAGAGACACTTCCT
ACTCCTCAAAGGTTAATTTTTTTTATATGAATTTCCCTATTTTGAACATC
TATGGTCTGAAAGCAACAGATTATTTATTTCTAAAAGAACG

Query= MSMg01no457_d13.b1 MSMg01no457_d13.b1 CHROMAT_FILE:
MSMg01no457_d13.b1 PHD_FILE: MSMg01no457_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:21 2005
         (552 letters)



>mm_chr8_53458016_53458967
          Length = 952

 Score = 1013 bits (524), Expect = 0.0
 Identities = 546/554 (98%), Gaps = 2/554 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtttgctttccagaaattttccaaaaaaagttagaaatcctgttagaaaaacatttttga 60
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttgctttcccggaattttccaaaaaaagttagaaatcctgttagaaaaacatttttga 260

                                                                       
Query: 61  agacctgggtttgctctccagagatctgcagatggctcagctcctggtagagaaggacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacctgggtttgctctccagagatctgcagatggctcagctcctggtagagaaggacat 320

                                                                       
Query: 121 ctaaacaaggaaggcctaatcctttttgctagctcatttcatgcagaccaaaagtccagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaacaaggaaggcctaatcctttttgctagctcatttcatgcagaccaaaagtccagt 380

                                                                       
Query: 181 ttattatgtacatatcgattcagttatttattacaggttccctttggattaacctatgaa 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ttattatgtacatatcaattcagttatttattacaggttccctttggattatcctatgaa 440

                                                                       
Query: 241 tcagctttataatgtctttattcttaggagacagcaagcacaatttttttt--gttgttt 298
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 441 tcagctttataatgtctttattcttaggagacagcaagcacaattttttttttgttgttt 500

                                                                       
Query: 299 tgtttttatttttcttattaacattgcaaaagaattcagagatctgtttgcctttataaa 358
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tgtttttatttttcttattaacattgcaaaagaattcagaggtctgtttgcctttataaa 560

                                                                       
Query: 359 cttagctgggtgggaccttttcttgagattaccattccagccagagtttgacctaaattt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttagctgggtgggaccttttcttgagattaccattccagccagagtttgacctaaattt 620

                                                                       
Query: 419 gctctgtaccaggctgactaggaatttaagaacctgcctgcatttttatctgcctatctt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctctgtaccaggctgactaggaatttaagaacctgcctgcatttttatctgcctatctt 680

                                                                       
Query: 479 tgggtctttccatcaaactagttcatcgtgaagctgcctctgttcctttagatctgtgga 538
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgggtctttctatcaaactagttcatcgtgaagctgcctctgttcctttagatctgtgga 740

                         
Query: 539 gccccttatacaat 552
           ||||||||||||||
Sbjct: 741 gccccttatacaat 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)