Query= MSMg01no457_k10.b1 MSMg01no457_k10.b1 CHROMAT_FILE:
MSMg01no457_k10.b1 PHD_FILE: MSMg01no457_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:56 2005
(181 letters)
>mm_chr8_94127544_94128124
Length = 581
Score = 348 bits (180), Expect = e-100
Identities = 180/180 (100%)
Strand = Plus / Minus
Query: 1 actcaagtcaattttttgcccagatctagactctgaggaccggacaaaaagcttggcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actcaagtcaattttttgcccagatctagactctgaggaccggacaaaaagcttggcata 321
Query: 61 gaggtagcgggcctgttgttccgtttgttctcacttcaccgtgccaactcgatggccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaggtagcgggcctgttgttccgtttgttctcacttcaccgtgccaactcgatggccctg 261
Query: 121 tctctactgcagaaagcagccagttctgtaactagtctgtaagctctgctgcaccactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctctactgcagaaagcagccagttctgtaactagtctgtaagctctgctgcaccactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_k10.g1 MSMg01no457_k10.g1 CHROMAT_FILE:
MSMg01no457_k10.g1 PHD_FILE: MSMg01no457_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:56 2005
(146 letters)
>mm_chr8_93949998_93950540
Length = 543
Score = 232 bits (120), Expect = 6e-66
Identities = 137/144 (95%), Gaps = 3/144 (2%)
Strand = Plus / Plus
Query: 1 accctctcaggactgtaataagatcatggcacctgatagatattttcaggttttactaaa 60
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 accctctcaggactgtaa---gatcatggcacctgatagatattttcagtttttactaaa 257
Query: 61 ttattccagtcacataacttagaattctcaaatattcctacaagacatttgttaaagaga 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 258 ttattccagtcacataacttagaattctcaaatattcctacaagacgtttgttaaagaga 317
Query: 121 actatttttttgtgctccttgcag 144
||||| |||||||||||||||||
Sbjct: 318 actataattttgtgctccttgcag 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 543
Length adjustment: 8
Effective length of query: 138
Effective length of database: 535
Effective search space: 73830
Effective search space used: 73830
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
