Query= MSMg01no458_p06.b1 MSMg01no458_p06.b1 CHROMAT_FILE:
MSMg01no458_p06.b1 PHD_FILE: MSMg01no458_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:41 2005
(430 letters)
>mm_chr8_123477493_123478322
Length = 830
Score = 787 bits (407), Expect = 0.0
Identities = 425/431 (98%), Gaps = 1/431 (0%)
Strand = Plus / Plus
Query: 1 aggctggctggatccccctgtctcctcctctatgcactaggataacaagtgagtgacacc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aggctggctggatccccctgtctcctcctctatgcaccaggataacaagtgagtgacacc 260
Query: 61 ttagccagctcttttacatggagggtaaggatccaaatcagcccttgtgcattttatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagccagctcttttacatggagggtaaggatccaaatcagcccttgtgcattttatttt 320
Query: 121 gagcaatctcctcagccctgttgaaatcacagggctcggggtgactcagtggatgaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gagcaatctcctcagccctgttgaaatcacagggctcggggtgactcagtggatgaagtg 380
Query: 181 cttgctgcacaggcatgaggacctgagatcaatccccagcacccacagaaagctgggcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgctgcacaggcatgaggacctgagatcaatccccagcacccacagaaagctgggcgt 440
Query: 241 ggcatc-cttgtctataactcagaactcaaggatgaggcaggatggtcctgccagcttgg 299
|||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcagcacatgtctataactcagaactcaaggatgaggcaggatggtcctgccagcttgg 500
Query: 300 tgaccggtctagcagagtcagtgagcgccaagttctttgagaggatctgacaaaaataag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaccggtctagcagagtcagtgagcgccaagttctttgagaggatctgacaaaaataag 560
Query: 360 acttaatgagttaagacaccagcatcaaatacagtcctccacatgtttcatatcacatgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttaatgagttaagacaccagcatcaaatacagtcctccacatgtttcatatcacatgg 620
Query: 420 gccagcagacc 430
|||||||||||
Sbjct: 621 gccagcagacc 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_p06.g1 MSMg01no458_p06.g1 CHROMAT_FILE:
MSMg01no458_p06.g1 PHD_FILE: MSMg01no458_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:41 2005
(231 letters)
>mm_chr8_123653944_123654574
Length = 631
Score = 422 bits (218), Expect = e-122
Identities = 227/230 (98%)
Strand = Plus / Minus
Query: 2 ccttttttttacatcaaggaccagcactttccttcctctgaaagctgagttgcagagccc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccttttttttacatcaaggaccagcactttccttcctctgaaagctgagttgcagagccc 372
Query: 62 accagcaagcttaaacacgggcaccccaaaggcctgagagtttcccccaaatttggaagc 121
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accagcaagcttaaacatgggcaccccaaaggcctgagagtttcccccaaatttggaagc 312
Query: 122 aggactgcactgcacggtaaccaacttagttgccttagtcagcattttgttgatctcccc 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 311 aggactgcactgcacggtaaccaacttagttgccttagtcagcactttgttgatctcccc 252
Query: 182 accccctccccctcaaccccactctctggtcacctcttatgggtttatgt 231
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 251 accccctccccctcaaccccgctctctggtcacctcttatgggtttatgt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
