Query= MSMg01no461_o09.b1 MSMg01no461_o09.b1 CHROMAT_FILE:
MSMg01no461_o09.b1 PHD_FILE: MSMg01no461_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:41 2005
(191 letters)
>mm_chr8_11278666_11279256
Length = 591
Score = 321 bits (166), Expect = 2e-92
Identities = 184/190 (96%)
Strand = Plus / Minus
Query: 1 aagaaaatgaacaggaggaggtgcaaggaagaccacagacccccgagagctaatgcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 390 aagaaaatgaacaggaggaggtgcaaggaagaccacagacccccgagagctaatgtacat 331
Query: 61 acgtacaagggtcttgtgggatttccttttgtttcggaaccattgtggctgtgaatgggt 120
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 330 acgtacaagggtcttgtgggatttccttttgttttggaaccattgtggccgtgaatgggt 271
Query: 121 ttgccctttcgcttctctccagtggcttattctttagagggcttttggcttttctggcgg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 270 ttgcccaatcgcttctctccagtggcttattctttagagggcttttggcttttccggcgg 211
Query: 181 ttactgggaa 190
||||||||||
Sbjct: 210 ttactgggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_o09.g1 MSMg01no461_o09.g1 CHROMAT_FILE:
MSMg01no461_o09.g1 PHD_FILE: MSMg01no461_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:41 2005
(238 letters)
>mm_chr8_11051018_11051655
Length = 638
Score = 410 bits (212), Expect = e-119
Identities = 232/239 (97%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 1 tttanagtgttattagtgctaagagggaaagcctaaaatctgtac-aagctagttcgttg 59
|||| ||||||||||||||||||||||||||||||||||||| || ||| || |||||||
Sbjct: 201 tttaaagtgttattagtgctaagagggaaagcctaaaatctg-acaaagttacttcgttg 259
Query: 60 cgttgcaactgaagtgacctttcctgagaggaatcccggccgctctccatagctccatca 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cgttgcgactgaagtgacctttcctgagaggaatcccggccgctctccatagctccatca 319
Query: 120 tgagcccctgtcagcacttgggttaaattgttcttctggtgctccttgctgacactttaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgagcccctgtcagcacttgggttaaattgttcttctggtgctccttgctgacactttaa 379
Query: 180 agcaagaacatttatgaaggttaaacaaaaaggagcaaatctgtatttaaccatgggaa 238
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 agcaagaacatttatgaaggttaaacaaaaagaagcaaatctgtatttaaccatgggaa 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
