Query= MSMg01no462_c10.b1 MSMg01no462_c10.b1 CHROMAT_FILE:
MSMg01no462_c10.b1 PHD_FILE: MSMg01no462_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:03 2005
(289 letters)
>mm_chr8_103855637_103856325
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 ggctcattttcacacttcttgattccttcatggttgatgggccataaaggttctattgct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 489 ggctcattttcacacttcttgattccttcatggttgatgggccataaagtttctattgct 430
Query: 61 ccagatttattggaactggtgcttcgataagtatacatagtccagatagcaacaactatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccagatttattggaactggtgcttcgataagtatacatagtccagatagcaacaactatc 370
Query: 121 attaattatattaagagtatttctaaatcttgtatatacatctccaagccacaatatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attaattatattaagagtatttctaaatcttgtatatacatctccaagccacaatatttt 310
Query: 181 aactacaatttctgaaattttgaggatggctatttgtcatctctttatctcagagtcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aactacaatttctgaaattttgaggatggctatttgtcatctctttatctcagagtcaat 250
Query: 241 tatattaagcttaccctttatgtttgtatcctcaatgctgtggctcttg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tatattaagcttaccctttatgtttgtatcctcaatgctgtggctcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_c10.g1 MSMg01no462_c10.g1 CHROMAT_FILE:
MSMg01no462_c10.g1 PHD_FILE: MSMg01no462_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:03 2005
(241 letters)
>mm_chr8_103685532_103686174
Length = 643
Score = 443 bits (229), Expect = e-129
Identities = 239/243 (98%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 ggcatagccacccaaactcccgagtgagcattggaaagaggagagacagataatgctctg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcatagccacccaaactcctgagtgagcattggaaagaggagagacagataatgctctg 260
Query: 61 caagctgattccacttatttctatacagatatagataacagagcattgatgccagccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagctgattccacttatttctatacagatatagataacagagcattgatgccagccaca 320
Query: 121 gttctggaccagagattctttataataacagtgaaattaaagcagacaaaaatgaatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttctggaccagagattctttataataacagtgaaattaaagcagacaaaaatgaatgct 380
Query: 181 catc--cagtctgtttcatctacacacacacacacacacacacacacacacacacacaca 238
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 catcttcagtctgtttcatctacaaacacacacacacacacacacacacacacacacaca 440
Query: 239 cac 241
|||
Sbjct: 441 cac 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 643
Length adjustment: 9
Effective length of query: 232
Effective length of database: 634
Effective search space: 147088
Effective search space used: 147088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
