Query= MSMg01no466_p19.b1 MSMg01no466_p19.b1 CHROMAT_FILE:
MSMg01no466_p19.b1 PHD_FILE: MSMg01no466_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:42 2005
(310 letters)
>mm_chr8_63291277_63291986
Length = 710
Score = 522 bits (270), Expect = e-153
Identities = 300/310 (96%)
Strand = Plus / Minus
Query: 1 tgccgaccttggccatttctagatctttatgatggtcgaggagttcctgaaaaggaaatt 60
||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||
Sbjct: 510 tgccgaccttggccatttctagatctttatgatggtcaaggagtccctgtaaaggaaatt 451
Query: 61 aaatcttttgaagaggtcagaatgagaaagctattccttagagactacaattccaaagac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 450 aaatcttttgaagaggtcagaatgagaaagttattccttagagactacaattccaaagac 391
Query: 121 ctttggccaagttactcgaggtgacagcaaccagcatccagggcagcaaaccagtaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ctttggccaagttactcgaggtgacagcaaccagcatccagggcagcaaaccagtaggca 331
Query: 181 aagagaccgtagggatgctaaccagtgggagaaggaatcggtgccataagcacagagccc 240
||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 330 aagagactgtagggatgctaaccagtgggagaaggaattggtgccacaagcacagagccc 271
Query: 241 cacacctattctggccttgtgcaaggagagggtagggttggtttatttatttctccaata 300
|||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 270 cacacctagtcaggccttgtgcaaggagagggtaaggttggtttatttatttctccaata 211
Query: 301 gcttttctca 310
||||||||||
Sbjct: 210 gcttttctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_p19.g1 MSMg01no466_p19.g1 CHROMAT_FILE:
MSMg01no466_p19.g1 PHD_FILE: MSMg01no466_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:42 2005
(244 letters)
>mm_chr8_63119153_63119798
Length = 646
Score = 449 bits (232), Expect = e-131
Identities = 242/246 (98%), Gaps = 2/246 (0%)
Strand = Plus / Plus
Query: 1 attctttctctagctcttcaccacttctagatgggagtatgtggagcctgcactgagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 attctttctctagctcttcaccacttctagatgggagtatgtggagcctgcgctgagagg 260
Query: 61 gtatctttagagtatgggttgctacagcggattttgtgatcagtg--gaaagaagaatac 118
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 261 gtatctttagagtatgggttgctacagcggattttgtgatcagagaggaaagaagaatac 320
Query: 119 ttcctgtagcagataacttaagtgtaatccttgccctttccgtccactgaggactggagg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcctgtagcagataacttaagtgtaatccttgccctttccgtccactgaggactggagg 380
Query: 179 ctgctgatggtcagagggaaagcgaaggggaaaggtttgtttcctgaagaagtaaagggg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgctgatggtcagagggaaagcgaaggggaaaggtttgtttcctgaagaagtaaagggg 440
Query: 239 ttggag 244
||||||
Sbjct: 441 ttggag 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 646
Length adjustment: 9
Effective length of query: 235
Effective length of database: 637
Effective search space: 149695
Effective search space used: 149695
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
