Query= MSMg01no467_k11.b1 MSMg01no467_k11.b1 CHROMAT_FILE:
MSMg01no467_k11.b1 PHD_FILE: MSMg01no467_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:35 2005
(441 letters)
>mm_chr8_112942101_112942941
Length = 841
Score = 702 bits (363), Expect = 0.0
Identities = 417/437 (95%), Gaps = 4/437 (0%)
Strand = Plus / Plus
Query: 1 agcccctccccctgtggggtcatctccccccacagcactgtgagcataccactagccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcccctccccctgtggggtcatctccccccacagcactgtgagcataccactagccttg 260
Query: 61 gagacgcaggtcactggagcacatcgatccatagtttacatctccgtcttcgggagccag 120
||||| ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gagacacaggtcattggcgcacatcgatccatagtttacatctccgtctttgggagccag 320
Query: 121 gaagcccctctggtgagtcagttttcagaatcgccatcaaggtcacatgctccctactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gaagcccctctggtgagtcagttttcagaatcgccatcaaggtcacatgctccctaccat 380
Query: 181 agaggcttttagcttcttccttggaggggtacgtcgtcatcgtatatcctttggtttcta 240
|||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||| ||
Sbjct: 381 agaggcttttagcttcttccttggaggggtgcgtcgttatcgtgtatcatttggttttta 440
Query: 241 cttttacaaggctttatgttttcattctgcagaagtaaaacacgtgtgttatattacctg 300
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 cagttacaaggctttatgttttcattctgcagaagtaaaacatgtgtgttatattacctg 500
Query: 301 gagaaactgtatgcagatgcatccagaagttgtgaggtagtataggaaggaattgttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 aagaaactgtatgcagatgcatccagaagttgtgaggtagtataggaaggaattgtcctt 560
Query: 361 aagcctaacttgagtagcactattttcatatgcatatttcatattcatgcacacacacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcctaacttgagtagcactattttcatatgcatatttcatattcatgcacacacacac 620
Query: 421 a----catgcacacaca 433
| ||||||||||||
Sbjct: 621 atgcacatgcacacaca 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_k11.g1 MSMg01no467_k11.g1 CHROMAT_FILE:
MSMg01no467_k11.g1 PHD_FILE: MSMg01no467_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:35 2005
(472 letters)
>mm_chr8_112999701_113000572
Length = 872
Score = 882 bits (456), Expect = 0.0
Identities = 468/472 (99%)
Strand = Plus / Minus
Query: 1 atgaatagcttcataaagtcttgaatcttgagaaattctccattatttagagatcaccca 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgaatagcttcataaagtcttaaatcttgagaaattctccattatttagagatcaccca 528
Query: 61 ctcaatttcttacttttttgccactcacacatcattcaaatttaaaaatatttgcacctt 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 527 ttcaatttcttacttttttgccactcatacatcattcaaatttaaaaatatttgcacctt 468
Query: 121 ctcatttgcattgttgacccctatgaaatttgaaattattttctttatagtggaaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctcatttgcattgttgacccctatgaaatttgaaattattttctttatagtggaaattta 408
Query: 181 ggaacgcagtttgggctttcagttctgtttagaacacatcactctgaggactattattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggaacgcagtttgggctttcagttctgtttagaacacatcactctgaggactattattga 348
Query: 241 acagagcccttctattcttctgggttcaacaatttcaattttgtcatggctttatgaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acagagcccttctattcttctgggttcaacaatttcaattttgtcatggctttatgaatt 288
Query: 301 tgccattctgtttcttggctctctattccatttgcctctctgtacacaaagacactcatt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 287 tgccattctgtttcttggctctctattccatttgcctctctgtacacaaagacactcact 228
Query: 361 actattatgctcttaggttcaaaggggcttggctagtctcaaactttagcaatttcatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 actattatgctcttaggttcaaaggggcttggctagtctcaaactttagcaatttcatgt 168
Query: 421 aaattttaagatcaacttgtcagccttctgattgaaactgcattgtggatat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aaattttaagatcaacttgtcagccttctgattgaaactgcattgtggatat 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
