Query= MSMg01no468_j05.b1 MSMg01no468_j05.b1 CHROMAT_FILE:
MSMg01no468_j05.b1 PHD_FILE: MSMg01no468_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:50 2005
(171 letters)
>mm_chr8_82369316_82369886
Length = 571
Score = 313 bits (162), Expect = 3e-90
Identities = 168/170 (98%)
Strand = Plus / Plus
Query: 1 agatacagacagatgaatagcaatgtgcttgtaagcagcatcttgaacactggaggatca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 201 agatacagacagatgaatagcaatgtgcttgtaagcagcatcttgaaaactggagaatca 260
Query: 61 taaagaatgcttctacacactcaaacatgattaaaggctgttgctctagatagagcacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagaatgcttctacacactcaaacatgattaaaggctgttgctctagatagagcacaa 320
Query: 121 taatctaataaactctcagtccatgtgtagctgaagggaaattttaaatg 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatctaataaactctcagtccatgtgtagctgaagggaaattttaaatg 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_j05.g1 MSMg01no468_j05.g1 CHROMAT_FILE:
MSMg01no468_j05.g1 PHD_FILE: MSMg01no468_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:50 2005
(187 letters)
>mm_chr8_82574968_82575555
Length = 588
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%), Gaps = 1/187 (0%)
Strand = Plus / Minus
Query: 1 ttttatacttgccgaggccatattccaggtaaaaaacaaaacaaaac-aaaaaatatgac 59
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 387 ttttatacttgccgaggccatattccaggtaaaaaccaaaacaaaacaaaaaaatatgac 328
Query: 60 acaaaattcaaacaaacaaacaaatacgcataagttaaagcattactacgagcccttgta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acaaaattcaaacaaacaaacaaatacgcataagttaaagcattactacgagcccttgta 268
Query: 120 aggtccctgtccttcaaggtttgtttaacggagttgtaaatcatgcttttccttcttatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aggtccctgtccttcaaggtttgtttaacggagttgtaaatcatgcttttccttcttatt 208
Query: 180 ttacgtc 186
|||||||
Sbjct: 207 ttacgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 588
Length adjustment: 8
Effective length of query: 179
Effective length of database: 580
Effective search space: 103820
Effective search space used: 103820
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
