TCGGCCTCTATAATGTGNGGGCGGTAAANGAGTCACTAAAGCGNACACCA
CCGCGGAATTCAACTCATTCCACGAGTTTCCATTCTGCCTACCAGAGCTT
GAGACAGGAAACGATTCATTATTCCTATCCTGGTGCCATCAGTGGCAGGC
TCATTGTTTGGATGTCATTCTTATCTTGGAACGCTCTCATTTTTGTTTAA
AAATACACTTTGATCCATAATAGTGACAGCTGCTTGTCATCACAAATGTA
GCAGCAACCTGAGGTGTTTTCCAAGTCCTTATGATGAAACAATAAGCAAA
ATTCTACATAGGGGGCTGGAGAGATGATTTGTTGGCTAAGCGCATGGGCT
GCTCTTCCAGAGGCTATTGAGTTTAATTCCCAGCAGTCACATGGTGGCTC
ACAACCATTGGTAATGGAATCTTATGCCTTCTTCTGGTGTGTCAATAGCA
TATGCATATACATACAATCAATAAATAAATCTTTAACAAAACAAATGATC
AAACCTCTACTTAGGCACCAAGTATTTCTATAATCCATTTGCTATGCCAT
TCTAAACGCTTCAAAGAATTCCCCTGTTGTCGCCTTTTTTTTTTAACTAA
AAAAATCCGGGTCCTTTACTTTCACCTTTGTTACCCCTTTTGAAACTTTC
TTTGCCCCAAAACACCCTCACCTACTTCAACTCTTGTCTAACGTTTAACC
CCCCCTAAAACCCACCCCCGGTTTACTTCCCCTTTC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGCCAAGCAGCTGGGCTGAAGTGGC
CCTGGAGCTGCTGTTACCTTCATGGCCACTGTCAGAATTCTGAGACTCAG
CCACCAGCAAGGTGCAGAGTTCACGAACATGTCACTTTTCTGTGTTCCAC
TAATCAGAGGAAATGCTGCATTCTTCCCCCCAGGAATCAAGGGAGTGAAC
CCTGCTGCCAACAACAAAAACAGGCCAGCCAATAGCGTCCCCAGACACTT
TCCACTTCCTTCTCTGGCCATTCTGTCTGGTAGAACCTTACCTTTGTCTT
GCACCCTTCAGAGGACTCTGGAAAATGGAGTCTAAAGACTTCTAGCCTCG
GAGCTGATGGAATGAACACTTGAAGACTGAAATTTGAGTGACAGGACATC
ACGTCTAACACATATCTAAAATATCGTCTGAGACAGAATAATTAATTCAA
AGTAGGCTAAGACTGACTTTGGGTAATATTTTTTTTTAAGTGAAAAAAGA
AAGTAGTTGGTAAACAAATTCCCCTTCAAACAGAAGTATATTGTAGGTAT
AGAGTTGAAATTTCTAGTGTGAAAAAGCGCTAAGTAAATTTAATTAACTT
GCTATACTTCTTCACACTAATATCACCCCTTCCCGGTTTGGTGCTGGCTA
TCCCAAATGCAAATTCTTATGTAAAGTAAGCCTTTTTATTTCGGATACCT
GTTGATCCCCCTTTCTTTTCCCTTTTATT

Query= MSMg01no470_l16.b1 MSMg01no470_l16.b1 CHROMAT_FILE:
MSMg01no470_l16.b1 PHD_FILE: MSMg01no470_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:44 2005
         (244 letters)



>mm_chr8_37734183_37734826
          Length = 644

 Score =  472 bits (244), Expect = e-138
 Identities = 244/244 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccattctgcctaccagagcttgagacaggaaacgattcattattcctatcctggtgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tccattctgcctaccagagcttgagacaggaaacgattcattattcctatcctggtgcca 385

                                                                       
Query: 61  tcagtggcaggctcattgtttggatgtcattcttatcttggaacgctctcatttttgttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagtggcaggctcattgtttggatgtcattcttatcttggaacgctctcatttttgttt 325

                                                                       
Query: 121 aaaaatacactttgatccataatagtgacagctgcttgtcatcacaaatgtagcagcaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaaatacactttgatccataatagtgacagctgcttgtcatcacaaatgtagcagcaac 265

                                                                       
Query: 181 ctgaggtgttttccaagtccttatgatgaaacaataagcaaaattctacatagggggctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgaggtgttttccaagtccttatgatgaaacaataagcaaaattctacatagggggctg 205

               
Query: 241 gaga 244
           ||||
Sbjct: 204 gaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space:   149225
Effective search space used:   149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no470_l16.g1 MSMg01no470_l16.g1 CHROMAT_FILE:
MSMg01no470_l16.g1 PHD_FILE: MSMg01no470_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:44 2005
         (480 letters)



>mm_chr8_37525391_37526270
          Length = 880

 Score =  928 bits (480), Expect = 0.0
 Identities = 480/480 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgccaagcagctgggctgaagtggccctggagctgctgttaccttcatggccactgtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgccaagcagctgggctgaagtggccctggagctgctgttaccttcatggccactgtca 260

                                                                       
Query: 61  gaattctgagactcagccaccagcaaggtgcagagttcacgaacatgtcacttttctgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaattctgagactcagccaccagcaaggtgcagagttcacgaacatgtcacttttctgtg 320

                                                                       
Query: 121 ttccactaatcagaggaaatgctgcattcttccccccaggaatcaagggagtgaaccctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccactaatcagaggaaatgctgcattcttccccccaggaatcaagggagtgaaccctg 380

                                                                       
Query: 181 ctgccaacaacaaaaacaggccagccaatagcgtccccagacactttccacttccttctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgccaacaacaaaaacaggccagccaatagcgtccccagacactttccacttccttctc 440

                                                                       
Query: 241 tggccattctgtctggtagaaccttacctttgtcttgcacccttcagaggactctggaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggccattctgtctggtagaaccttacctttgtcttgcacccttcagaggactctggaaa 500

                                                                       
Query: 301 atggagtctaaagacttctagcctcggagctgatggaatgaacacttgaagactgaaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggagtctaaagacttctagcctcggagctgatggaatgaacacttgaagactgaaatt 560

                                                                       
Query: 361 tgagtgacaggacatcacgtctaacacatatctaaaatatcgtctgagacagaataatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagtgacaggacatcacgtctaacacatatctaaaatatcgtctgagacagaataatta 620

                                                                       
Query: 421 attcaaagtaggctaagactgactttgggtaatatttttttttaagtgaaaaaagaaagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attcaaagtaggctaagactgactttgggtaatatttttttttaagtgaaaaaagaaagt 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)