Query= MSMg01no471_c16.b1 MSMg01no471_c16.b1 CHROMAT_FILE:
MSMg01no471_c16.b1 PHD_FILE: MSMg01no471_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:19 2005
(630 letters)
>mm_chr8_14318430_14319465
Length = 1036
Score = 1038 bits (537), Expect = 0.0
Identities = 608/639 (95%), Gaps = 17/639 (2%)
Strand = Plus / Plus
Query: 5 gaattccttgatttttcgtcttcaagaagttcatggtctatcttgaagcttgca------ 58
||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 200 gaattccttgatttt--gtcttcaagaagttcatggtctatcttgatgcttgcacccttc 257
Query: 59 -tgggctaaggaccttcacccctagcccttggcccagataagctgctcaaatcttaacaa 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atgggctaaggaccttcacccctagcccttggcccagataagctgctcaaatcttaacaa 317
Query: 118 tctagttactttgtaggacctaccaaagtagtatcaactttaaagatgccttttaactga 177
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 tctagttactttgtaggacctaccaaagtagtatcaactttaaagatgcctcttaactga 377
Query: 178 aagaaaagaatgcatttcatcatcagtgacatttactcatgcatatgcttgcatggtttg 237
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 378 aagaaaaaaatgcatttcatcatcagtcacattgactcatgtatatgcttgcatggtttg 437
Query: 238 gatagaaaatgactccttcgtgaagatttggtctcagctgatggcattctaaggaggcag 297
|||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 438 gatagaaaatgactccttcgtgaagatttgatcccagctgatggctttctaaggaggcag 497
Query: 298 gcctgcttgcaggaagtccagcattagagcatgcctcagcagagagtctcgtctctgacc 357
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 498 gcctgcttgcaggaagtccagcattagagcatgcctcagcagggagtctcgtctctgacc 557
Query: 358 cttttgtcactttgcttcctggctgccatgagatgaacagcttcttctgcccagttct-- 415
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 cttctgtcactttgcttcctggctgccatgagatgaacagcttcttctgccctgttctcc 617
Query: 416 -acaaccatgatactctgactagactcagcttcccctacctattac---aatactctacc 471
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 618 tacaaccatgatactctgactagactcagcttcccctacctattactacaatactctacc 677
Query: 472 tcaatgttttaccaccatgctactctatctagactcagattctcctatca-ccatgatgc 530
||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 678 tcaatgttttaccaccatgctactctacctagactcagattctccta-caaccatgatgc 736
Query: 531 tctacctagactcagcttctcctaccaccatgatcctctacttagacttagcttctccta 590
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 737 tctacctagactcagcttctcctaccaccacgatcctctacttagacttagcttctccta 796
Query: 591 ccaccatgatactttattttgactcagcttctcctacaa 629
|||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ccaccatgatactttattttgactcagcttctcctacaa 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1036
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1026
Effective search space: 636120
Effective search space used: 636120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_c16.g1 MSMg01no471_c16.g1 CHROMAT_FILE:
MSMg01no471_c16.g1 PHD_FILE: MSMg01no471_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:19 2005
(501 letters)
>mm_chr8_14498186_14499086
Length = 901
Score = 922 bits (477), Expect = 0.0
Identities = 495/501 (98%)
Strand = Plus / Minus
Query: 1 atttgaatgttataggctggaggtaatctctgcagttggaggcttccaagagtgaatcaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atttgactgttataggctggaggtaatctctgcagttggaggcttccaagagtgaatcaa 642
Query: 61 gaggattcagggacaagccacagaggcctggcagccatgacactatgggatatttcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gaggattcagggacaagccacagaggcctggcagccatgacactatgggatatttcaaca 582
Query: 121 cctggcaagcctgtgccttgtaaaagaaaccacacaactgatgggcagatgagtcttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cctggcaagcctgtgccttgtaaaagaaaccacacaactgatgggcagatgagtcttccc 522
Query: 181 tgacatccactcatgtgcctgtgtccttccccgccttcatccacattaagcaaatatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgacatccactcatgtgcctgtgtccttccccgccttcatccacattaagcaaatatcaa 462
Query: 241 acactattgccggtccaactcagctcctctacaacaacatttccaccagatcctggtggg 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 461 acactattgccggtccaactcagctcctctacgacaacatttccaccagatcctggtggg 402
Query: 301 ggctgggagaagtgtgacctcctggaagctatgaatgagacgacacaggaataaagccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggctgggagaagtgtgacctcctggaagctatgaatgagacgacacaggaataaagccaa 342
Query: 361 gaactatacagcagccaggtttgcattctcattaagaagtcaggaagcagggtccatcag 420
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 341 gaactatacagcagccaggtttgcattctcattaagaagttgggaagcagggtccatcag 282
Query: 421 aggagccagtgatcccagcactcagggagagtgattgggtgaggtgggcgtgggctagta 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 281 aggagccagtgatcccagcactcagggagagtgattgggtgaggtgggcatgggctagta 222
Query: 481 aagacatggattattttgtag 501
|||||||||||||||| ||||
Sbjct: 221 aagacatggattatttggtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
