Query= MSMg01no473_l14.b1 MSMg01no473_l14.b1 CHROMAT_FILE:
MSMg01no473_l14.b1 PHD_FILE: MSMg01no473_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:55 2005
(516 letters)
>mm_chr8_115827268_115828183
Length = 916
Score = 959 bits (496), Expect = 0.0
Identities = 511/516 (99%)
Strand = Plus / Plus
Query: 1 gcagagaggctcatctggcagccatctggctgattgggaatatcccgattcatttagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagagaggctcatctggcagccatctggctgattgggaatatcccgattcatttagagc 260
Query: 61 tatccttgatcgctggaaactttgtcgcctgctcatcatgcacgtactcagcacggctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatccttgatcgctggaaactttgtcgcctgctcatcatgcacgtactcagcacggctct 320
Query: 121 gtgcttgcttggtgacaggcagtggatcaggagccaagaaaaaattatgagtctaggcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcttgcttggtgacaggcagtggatcaggagccaagaaaaaattatgagtctaggcta 380
Query: 181 tgctggagtcctacctctgcacctctcttctagattattctttcccttctaccttatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctggagtcctacctctgcacctctcttctagattattctttcccttctaccttatagt 440
Query: 241 tcacgttctatttatatgctctgtgatcaaaaagtgctattgtttagataccaacacccc 300
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacgttctatacagatgctctgtgatcaaaaagtgctattgtttagataccaacacccc 500
Query: 301 taccaagtgcctttgttctgcttccagatcaaataaagtattccaatttagttgccattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taccaagtgcctttgttctgcttccagatcaaataaagtattccaatttagttgccattg 560
Query: 361 aagataaagaggaatgatcaaagacacaaagagacttatttactccaaattaaaagcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagataaagaggaatgatcaaagacacaaagagacttatttactccaaattaaaagcaca 620
Query: 421 atagatcaagtagtgctttgttttataggtaatttcatgactaaaaccacaccgtaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagatcaagtagtgctttgttttataggtaatttcatgactaaaaccacaccgtaataa 680
Query: 481 tatagtttggaactgcttcctacacaccacaccatt 516
||||||||||||| |||||||||||| |||||||||
Sbjct: 681 tatagtttggaaccgcttcctacacatcacaccatt 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_l14.g1 MSMg01no473_l14.g1 CHROMAT_FILE:
MSMg01no473_l14.g1 PHD_FILE: MSMg01no473_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:55 2005
(239 letters)
>mm_chr8_115952356_115952994
Length = 639
Score = 393 bits (203), Expect = e-114
Identities = 227/237 (95%), Gaps = 4/237 (1%)
Strand = Plus / Minus
Query: 1 ttatttctaaaaattatgtcggttgttaaaaaggctgttttctgattcaaaattgcaact 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 303 ttatttctaaaaattatgtcggttattaaaaaggctgttttctgattcaaaattgcaact 244
Query: 61 aacagcaaagaaatacaaagatttgcatgtttaagtaagtcactttttaaaattataata 120
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 243 aacggcaaagaaatacaaagatttgcatgtttaagtaagtcactttttaaaattgtaata 184
Query: 121 tttttattcttaaaaatatttagtgtgtgtacatgcaactgtgtgtgtctgattttgtgt 180
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 183 tttttattcttaaaaatatttagtgtgtgtagatgcaactgtgtgtatctgattttgtgt 124
Query: 181 gtttgtatgtttgtgtgaatctgtgtgtgtatgtatttatgtgtatatatgtgtgtg 237
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 123 gtttgt----ttgtgtgaatctgtgtgtgtatgtgtttatgtgtatatatgtgtgtg 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
