Query= MSMg01no475_d02.b1 MSMg01no475_d02.b1 CHROMAT_FILE:
MSMg01no475_d02.b1 PHD_FILE: MSMg01no475_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:53 2005
(543 letters)
>mm_chr8_65466746_65467689
Length = 944
Score = 1015 bits (525), Expect = 0.0
Identities = 537/541 (99%), Gaps = 1/541 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttttctattccctcttatctgtgggtaaggagtgaccttaatctagaagata 63
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttttctaatccttcttatctgtgggtaaggagtgaccttaatctagaagata 263
Query: 64 tattcatccacccatcccataaggcagtgctgccatcttcagaacaaatggcacttgaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tattcatccacccatcccataaggcagtgctgccatcttcagaacaaatggcacttgaag 323
Query: 124 tgacatttatattttaattttagcccatgagctttgatctttatatgcccctatttatgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgacatttatattttaattttagcccatgagctttgatctttatatgcccctatttatgc 383
Query: 184 aaatctcaagtgaccaaaactcatttggatgactggatccctaagctgcttgtaatctag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatctcaagtgaccaaaactcatttggatgactggatccctaagctgcttgtaatctag 443
Query: 244 ctttactctgctatcactgtattgataacaattatactctctcccaccaacaaaaaacaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttactctgctatcactgtattgataacaattatactctctcccaccaacaaaaaacaa 503
Query: 304 actcatgaccacaaaactcaggtttatctcttaaccctgtaatcctgtgtcaatactgcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 actcatgaccacaaaactcaggtttatctcttaaccctgtaatcctgtgtcaatactgcc 563
Query: 364 tacctaaagatccatttggtgagctaaagggagaactcttgaaaccagaaggaactatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tacctaaagatccatttggtgagctaaagggagaactcttgaaaccagaaggaactatga 623
Query: 424 gtatctaagcattagtaccaggtatgtcattgctggaccaaagtatggaccat-tactga 482
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 624 gtatctaagcattagtaccaggtatgtcattgctggaccaaagtatggaccagatactga 683
Query: 483 cattttttggtccaaggtcagaccaacaaaccaattcagactattttacccagtgcttag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cattttttggtccaaggtcagaccaacaaaccaattcagactattttacccagtgcttag 743
Query: 543 g 543
|
Sbjct: 744 g 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 944
Length adjustment: 10
Effective length of query: 533
Effective length of database: 934
Effective search space: 497822
Effective search space used: 497822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_d02.g1 MSMg01no475_d02.g1 CHROMAT_FILE:
MSMg01no475_d02.g1 PHD_FILE: MSMg01no475_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:53 2005
(418 letters)
>mm_chr8_65634165_65634982
Length = 818
Score = 746 bits (386), Expect = 0.0
Identities = 407/414 (98%)
Strand = Plus / Minus
Query: 1 attaactgaattataataatgatcatttcaattgcttgtaggaaatcagagtattaaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 614 attaactgaattataataatgatcatttcaattgcttgtaggaaatcaaagtattaaaaa 555
Query: 61 tgataatattaaattctctggcatgctaagaaatataattaactacctagagagaaaaga 120
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 554 tgataacattaaattctctggcatgctaagaaatataattgactacctagagagaaaaga 495
Query: 121 taaagaaatattcactggatgaagagattaaccaaaaccagaaatatgtaaaacactaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 taaagaaatattcactggatgaagagattaaccaaaaccagaaatatgtaaaacactaat 435
Query: 181 taggttccttactgtccaacaaatgccaactgctttacaaataatagattaaaagaataa 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 taggttccttactctccaacaaatgccaactgctttacaaataatagattaaaagaataa 375
Query: 241 gagtgagcaaattatgtacattttgttataggtagaagatctaaaagaatttttccccca 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 374 gagtgagcaaattatgtacattttgttataggtagaagatctaaaataatttttccccca 315
Query: 301 cagttgggatctcttattaaatcttcttctcttgtaataataatcctcttttctaaaata 360
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 314 cagttgggacctcttattaaatcttcttatcttgtaataataatcctcttttctaaaata 255
Query: 361 aatgttgcagcttcagaaatgttactaacataactgtcttttcattgtctacat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aatgttgcagcttcagaaatgttactaacataactgtcttttcattgtctacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
