Query= MSMg01no475_d04.b1 MSMg01no475_d04.b1 CHROMAT_FILE:
MSMg01no475_d04.b1 PHD_FILE: MSMg01no475_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:53 2005
(248 letters)
>mm_chr8_49494105_49494752
Length = 648
Score = 368 bits (190), Expect = e-106
Identities = 199/202 (98%)
Strand = Plus / Plus
Query: 47 ggtcatattcagaacagggacacagctaagtcccagtcagcagctacgaccaaggaaggg 106
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtcatattcagaacagagacacagctaagtcccagtcagcagctacgaccaaggaaggg 306
Query: 107 ctttggtgaccttttcttttgattgtgctcaaatgtgactggaaatacgttagaagttac 166
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 307 ctttggtgaccttttcttttgattgtgctcgaatgtgactggaaatacgttagaagttac 366
Query: 167 taagaattggtttgcctagatagcatgacaattagttattatatatgaatattttgtaaa 226
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 367 taagaattggtttgcctagatagcatgaaaattagttattatatatgaatattttgtaaa 426
Query: 227 aattactgattatctagaatca 248
||||||||||||||||||||||
Sbjct: 427 aattactgattatctagaatca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_d04.g1 MSMg01no475_d04.g1 CHROMAT_FILE:
MSMg01no475_d04.g1 PHD_FILE: MSMg01no475_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:53 2005
(137 letters)
>mm_chr8_49676781_49677315
Length = 535
Score = 213 bits (110), Expect = 4e-60
Identities = 130/138 (94%), Gaps = 4/138 (2%)
Strand = Plus / Minus
Query: 1 aatacctgagactcatagaaaggggaaaaaaaaaccaagtactacaaatttttctttgaa 60
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 335 aatacctgagacccatagaaaggggaaaaaaa---caagtactacaaatttttctttgaa 279
Query: 61 tatgccacccctcctcaaaacacaaagactaagtgtaattttattttt-gtttaagttat 119
|||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 278 tatgccacccctccccaaaacacaaagactaagtgtaatttttttttttgtttaagttat 219
Query: 120 atgtgtgttggtgttttt 137
|||||||||||||||||
Sbjct: 218 gtgtgtgttggtgttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 535
Length adjustment: 8
Effective length of query: 129
Effective length of database: 527
Effective search space: 67983
Effective search space used: 67983
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
