XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TAAGCATAACAGGAATTTTAGTCTTCAGAGTGATACTTACGAGAAGAGTC
AGAATCTGTGTTCATCTGATGAATTAGTCTCTCTGGCAGCCACCGCGCTC
CATCTTCATCTCGTGAAAAAACACAAACTGAGCCCCTACCCCAAAATAGA
ACTGGATCTGGACCCTTCCATTCATTAGTCAGGGGGTCCTTCCATTTTAA
AGCACCATCTACAGCACACAACTAGATTATTTGTGCTGGAACAGGGGAAA
CTGTGTGTCTGTTGTTCCGATGTCCGATACGAAGATCCTTTCCTGTGGAG
CTCCACAGCAGCAGCATTTCTCTGAGCATCCCTCTGCCATTCTTCAGGCC
CCAGTTCTGGCGCCAAAATGTTACGGCCGCCAGCAGCTCGCAACGTGAAC
GGTTCGACTGATATGGCTACTCGAGCTGTAAGAGAGGAATCTAGATGGGG
CGAAAGAAGAAACGGAACTAAGACAAATTCATTCTGATCAAAGCTCAAAT
TTTATTGTTGTGACACTAGTTATGAAGGAAGGGGGAGGGGACCCAATTCC
TGCTGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGCGTGGCTCTGCA
GGTTCCAGCAGTGGGCGCGGCACAACGACCGAATAGGATACTCCCCCCTT
GAGCAATCACGCTTCAAGTCGGCTGACGTTAGACCACCAAAATGACTCCT
ATTTACCATATAAAAG

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGAGTAAGGATACTCCTAGTAGGACAATAAA
CATGATGTCCTGAGAGAAGGCCTTTGTCTTTCCTCATTCTCTCTGTGTGT
TACTACTGCCTACAGCCTTGTGCCTTTATTAAACATTCCTTCCCATATTC
CCATATCTAGCTGCTCATTACCCAGAGTATGAACTTTCACAGGAAATAAA
TAAATAAATAAAAGAATTACATTCTTATTCCACATGGTCATGGTTCACCA
CTTATAAGGTGCTTTTTTTTGAAATCCTCTTCATTCATTTGACTAATTTG
AATGTCTTTATTACTATTCATGGATACAATTGTAAGTCTGCTGTCAAGAC
CTGATGACCCAAAGTATGGGTCTATTCTCTAAGTACTTCATGGATAAGTA
TAGATTGTTCAAGCTCATCATCATCTAGCATGCCACCTTTGTTTTCCAGA
CCTTGAAATATGCACAAATAAAGCACTTATAACCAGCGCTAAAAACTCAG
CAGGCATGTGTCAAATCATGATAAAGATATACTCAAAATTCATTTATTGA
GCGCAATTACAAAGATATCCTCAATAGTTGCTTGCTCAACAGTTGACTTA
TGACACATGAAAAATAACAGAATTAACCACTCTAATGCCTTTTAGGATGA
TAAACTCTTAAGGTCGACTATTTTACCACTTTGTCTATATTCACAACACC
CACTTCTTCATATTCCCCCG

Query= MSMg01no476_a20.g1 MSMg01no476_a20.g1 CHROMAT_FILE:
MSMg01no476_a20.g1 PHD_FILE: MSMg01no476_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:02 2005
         (463 letters)



>mm_chr8_61366584_61367446
          Length = 863

 Score =  845 bits (437), Expect = 0.0
 Identities = 459/475 (96%), Gaps = 16/475 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgagtaaggatactcctagtaggacaataaacatgatgtcctgagagaaggcctttgtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgagtaaggatactcctagtaggacaataaacatgatgtcctgagagaaggcctttgtct 252

                                                                       
Query: 61  ttcctcattctctctgtgtgttactactgcctacagccttgtgcctttattaaacattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcctcattctctctgtgtgttactactgcctacagccttgtgcctttattaaacattcc 312

                                                                       
Query: 121 ttcccatattcccatatctagctgctcattacccagagtatgaactttcacaggaaataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttcccatattcccatatctagctgctcattacccagagtatgaactttcacaggaaataa 372

                                                                       
Query: 181 ataaataaataaa--------agaattacattcttattccacatggtcatggttcaccac 232
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ataaataaataaataaataaaagaattacattcttattccacatggtcatggttcaccac 432

                                                                       
Query: 233 ttataaggtgctt----ttttttgaaatcctcttcattcatttgactaatttgaatgtct 288
           |||||||||||||    ||    |||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttataaggtgcttcagctt----gaaatcctcttcattcatttgactaatttgaatgtct 488

                                                                       
Query: 289 ttattactattcatggatacaattgtaagtctgctgtcaagacctgatgacccaaagtat 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttattactattcatggatacaattgtaagtctgctgtcaagacctgatgacccaaagtat 548

                                                                       
Query: 349 gggtctattctctaagtacttcatggataagtatagattgttcaagctcatcatcatcta 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gggtctattctctaagtacttcatggataagtatagattgttcaagctcatcatcatcta 608

                                                                  
Query: 409 gcatgccacctttgttttccagaccttgaaatatgcacaaataaagcacttataa 463
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcatgccacctttgttttccagaccttgaaatatgcacaaataaagcacttataa 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)