Query= MSMg01no477_l15.b1 MSMg01no477_l15.b1 CHROMAT_FILE:
MSMg01no477_l15.b1 PHD_FILE: MSMg01no477_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:15 2005
(199 letters)
>mm_chr8_80802307_80802905
Length = 599
Score = 284 bits (147), Expect = 2e-81
Identities = 156/159 (98%)
Strand = Plus / Minus
Query: 1 ctccactagggcaatggagcagctcagatgtccaccagatgatgaacgtatgatgaaggc 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 340 ctccactagggcaatggagcagctcagatgtccaccagatgatgagcatatgatgaaggc 281
Query: 61 gtgtgaaaaccatatggtgaagtggtatttggtatttggtggatgtatgaaagacagaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gtgtgaaaaccatacggtgaagtggtatttggtatttggtggatgtatgaaagacagaag 221
Query: 121 ccatgatttatgcttcaagttgtgtgtgtgtgtgtgtgt 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccatgatttatgcttcaagttgtgtgtgtgtgtgtgtgt 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no477_l15.g1 MSMg01no477_l15.g1 CHROMAT_FILE:
MSMg01no477_l15.g1 PHD_FILE: MSMg01no477_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:15 2005
(614 letters)
>mm_chr8_80705863_80706870
Length = 1008
Score = 1106 bits (572), Expect = 0.0
Identities = 601/614 (97%), Gaps = 6/614 (0%)
Strand = Plus / Plus
Query: 1 aagttttcagatgggacacaaggaggaagtagcctttcttaaactgatttggttgttggg 60
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aagttttcagatgggacacaaagaggaagtagcctttcttaaacttatttggttgttggg 260
Query: 61 gcctatgacatgaggagccagtgtgtgacctaaagccaagtggtgggaagagaggttaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctatgacatgaggagccagtgtgtgacctaaagccaagtggtgggaagagaggttaac 320
Query: 121 agaatacatgtgacatgaaggcagatatcggggctagctggaaaaaaaaagaaaaccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatacatgtgacatgaaggcagatatcggggctagctggaaaaaaaaagaaaaccagt 380
Query: 181 ggggagaggtaagagctggataatgttacatatgtatgaagtgcatgataaatccaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggagaggtaagagctggataatgttacatatgtatgaagtgcatgataaatccaatgg 440
Query: 241 ctttgctttctaatgtttaaatgtaataatttggattttattcacagccaatgtatcgaa 300
|||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttacatactaatgtttaaatgtaataatttggattttattcacagccaatgtatcgaa 500
Query: 301 tgcaatttgcagtggatgattttaatttctccaagtgacgaaaattaatgtttctcactt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgcaatttgcagtggatgattttaatttctccaagtgacgaaaattaatgtttctcactt 560
Query: 361 ccttctacatgggacagtagggcaagcttaactgatcggtgcaactcgctcagctttaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttctacatgggacagtagggcaagcttaactgatcggtgcaactcgctcagctttaac 620
Query: 421 ccaaatcatgattctttcccatccaaactgagctggaagtgctcaggcttgccccacgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaaatcatgattctttcccatccaaactgagctggaagtgctcaggcttgccccacgcc 680
Query: 481 agcagtcttctcctgtgctctcaagctctttctttagtcttcctgtttcttcactaagtc 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtagtcttctcctgtgctctcaagctctttctttagtcttcctgtttcttcactaagtc 740
Query: 541 ttctagcctgttccagttcaaagaacacttccttttgggtatcacgtgattgtcagccag 600
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 ttctagcctgttccagttcaaagaac------ttttgggtatcacgtgattgtcagccag 794
Query: 601 gctaagcagcagac 614
||||||||||||||
Sbjct: 795 gctaagcagcagac 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1008
Length adjustment: 10
Effective length of query: 604
Effective length of database: 998
Effective search space: 602792
Effective search space used: 602792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
