Query= MSMg01no479_g23.b1 MSMg01no479_g23.b1 CHROMAT_FILE:
MSMg01no479_g23.b1 PHD_FILE: MSMg01no479_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:26 2005
(569 letters)
>mm_chr8_101922043_101923009
Length = 967
Score = 1050 bits (543), Expect = 0.0
Identities = 562/569 (98%), Gaps = 2/569 (0%)
Strand = Plus / Minus
Query: 1 attccaaatcgcttctagtcccgtaggttctggatacagacttcctcattagctttatca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 attccaaatcgcatctagtcccgtaggttctggatacagacttcctcattagctttatca 708
Query: 61 tatgtataaaagcaaaaaaaaacagatgcttagatacattaataaaccagattatgaata 120
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 707 tatgtataaaagc--aaaaaaactgatgcttagatacattaataaaccagattatgaata 650
Query: 121 cagcacaagtgaatgtactacatgaaattaaatcatggcggtgattcccaagataataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cagcacaagtgaatgtactacatgaaattaaatcatggcggtgattcccaagataataat 590
Query: 181 ttcaaccatcataccatattatgtttcagtcactgagtaccaggggtttacaatttgcac 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 589 ttcaaccatcataccatattatgtttcagtcactgagtaccaggggtttataatttgcac 530
Query: 241 ttgacttgtgtgtataggatacaaaatcagtacattcatccttttctatattcaaatttt 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 529 ttgacttgtgtgtataggatacaaaatcagtacattcatccttctctatattcaactttt 470
Query: 301 ctttaaccagctctaaggcaagcagttttcatcccgtatgaaattctggaatcacatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctttaaccagctctaaggcaagcagttttcatcccgtatgaaattctggaatcacatgca 410
Query: 361 tacatgcatatgtagttaatggatggatgattctcccctgattcaaatagttatgttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tacatgcatatgtagttaatggatggatgattctcccctgattcaaatagttatgttatt 350
Query: 421 atgacggtgaatcaattaagacatgtcctgcataatgtaaataactgaagagcattccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atgacggtgaatcaattaagacatgtcctgcataatgtaaataactgaagagcattccat 290
Query: 481 ttttaaatgaatagaaaaggcaattaaaccattttttaaatgtagtatctgatggctgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ttttaaatgaatagaaaaggcaattaaaccattttttaaatgtagtatctgatggctgat 230
Query: 541 ttcatacccatttctaaaacgaattgaaa 569
|||||||||||||||||||||||||||||
Sbjct: 229 ttcatacccatttctaaaacgaattgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 967
Length adjustment: 10
Effective length of query: 559
Effective length of database: 957
Effective search space: 534963
Effective search space used: 534963
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_g23.g1 MSMg01no479_g23.g1 CHROMAT_FILE:
MSMg01no479_g23.g1 PHD_FILE: MSMg01no479_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:26 2005
(579 letters)
>mm_chr8_101724548_101725527
Length = 980
Score = 1067 bits (552), Expect = 0.0
Identities = 573/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Plus
Query: 1 attaataaagtgaacaaaatgaatgaattgttagaatcaactcagaggagtaaaacacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaataaagtgaacaaaatgaatgaattgttagaatcaactcagaggagtaaaacacca 260
Query: 61 aacagaagtaaagcagacatgtatttaaaatgaacatagtgttatttacattttaacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagaagtaaagcagacatgtatttaaaatgaacatagtgttatttacattttaacagt 320
Query: 121 tcatttacataatattttctaccataagagtgacaactggattagaaaactgagaaagta 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatttacataatgttttctaccataagagtgacaactggattagaaaactgagaaagta 380
Query: 181 caggaagggggcgggg-ggaggagcaaatgcattagtactatgtggggcaagtggaactc 239
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggaaggggggggggaggaggagcaaatgcattagtactatgtggggcaagtggaactc 440
Query: 240 tgtcaccagaaaaaaactggtaaggttgagcagattcagaaaaacctggtgagttctcat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcaccagaaaaaaactggtaaggttgagcagattcagaaaaacctggtgagttctcat 500
Query: 300 atctgagggtggtaggcatttcatatactccagaactagttcctgtcctggaacacatga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctgagggtggtaggcatttcatatactccagaactagttcctgtcctggaacacatga 560
Query: 360 cgaagacacaccatggtgaggactgtgacagtcagtcaggtagggcaaactctgaattgc 419
| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 561 ctaagacacaccatggagaggactgtgacaatcagtcaagtagggcaaactctgaattgc 620
Query: 420 atccacttgcaaaagaggcatccctaacatctcgaccaagccaatagaaagcatctgctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atccacttgcaaaagaggcatccctaacatctcgaccaagccaatagaaagcatctgctt 680
Query: 480 ttagaccccaacctgccccaaaatgtatataagaccctatccacaaggaataaaacacag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttagaccccaacctgccccaaaatgtatataagaccctatccacaaggaataaaacacag 740
Query: 540 gagatatttccccatggaccatctgagagtgtctgtctta 579
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagatatttccccatggaccatctgagagtgtctgtctta 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
