TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTCTCCTGACAAATTAGAACATGTAGCTAAAGACTTGCGGAAGCC
ATGAGACCCTTCCAATTATCTGATCATGTCTTAAATCATTTCTCTCATAA
TACATAACACAAATATTACTTTTTCACATAAAAATTGAAGAAGAAAAATA
ATACTGAAAATTTGCTCCATATTCATAGTCATTTTATTTTGTCCAATAAA
AAACTGTCTGGAAATACATTTCAGGACAAGCCAGCAGTTCTGCAGGTGTG
CAGGGAGACGTGACATATTCTTTCTATTAATAAATCACAACATTTCAACA
TTCTGATTTAACCGTTCCTCTTTTTGCCCTTCACCAACTCTAGAATGAAG
AAAATCAATAAATAAGATTGCACTCACCACCTCATACAATTTTTTACCAG
TCGGGGGCACAGCTATCCAATTAGGATTTGAGATTTGCTGAACATTTATT
ACCGGTTTCCAATTTATTCAGAGAAAACTTTTGGAGACCCATTTGGTAGA
AGCAATAAGTATTGCATTAATGTAAATCAGTATTGACTCTGCTGTGCACT
GCAGTGAGGAATTTGGTGCCCACAACACAATAGCTGCCTTTTTATTTTTC
ACTTAATAACAGACAAATGACCTANGGGAAACCCTTCACTCATTTCAGGA
GAAATCAGAGAAATATATAAACCAAAGTCTATTCATGAAAAATTTGACAT
CCCTTAGATCCTTTTTTCATAATATTACCATCNTAGTGACCCACCAAACT
ATGCAATATGATCTTN

CAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCCGTCTGGCGGTTCCTCAGAAAATTGTTTATAGTTCTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
TGGATATTAGCCCAAAACCTAGGATACCCCAGATATAAGATACAATTTTC
TAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGC
CCCTCCTTAGAAGTGGAACAAAACACCTTGGGAGGAGTTACAGAGACAAG
ATTGGAGN

Query= MSMg01no479_o22.b1 MSMg01no479_o22.b1 CHROMAT_FILE:
MSMg01no479_o22.b1 PHD_FILE: MSMg01no479_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:05 2005
         (578 letters)



>mm_chr8_60784839_60785816
          Length = 978

 Score = 1048 bits (542), Expect = 0.0
 Identities = 566/574 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttctcctgacaaattagaacatgtagctaaagacttgcggaagccatgagacc 64
           |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattctttctcctgagaaattagaacatgcagctaaagacttgcggaagccatgagacc 264

                                                                       
Query: 65  cttccaattatctgatcatgtcttaaatcatttctctcataatacataacacaaatatta 124
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 265 cttccaattatctgatcatgtcttaaatcatttatctcataatacataacacaaatgtta 324

                                                                       
Query: 125 ctttttcacataaaaattgaagaagaaaaataatactgaaaatttgctccatattcatag 184
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 ctttttcacataaaaattgaagaagaaaaataatactgaaaacttgctccatattcatag 384

                                                                       
Query: 185 tcattttattttgtccaataaaaaactgtctggaaatacatttcaggacaagccagcagt 244
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 tcattttattttgtccaataaaaaactgtctggaaatacattttaggacaagccagcagt 444

                                                                       
Query: 245 tctgcaggtgtgcagggagacgtgacatattctttctattaataaatcacaacatttcaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgcaggtgtgcagggagacgtgacatattctttctattaataaatcacaacatttcaa 504

                                                                       
Query: 305 cattctgatttaaccgttcctctttttgcccttcaccaactctagaatgaagaaaatcaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattctgatttaaccgttcctctttttgcccttcaccaactctagaatgaagaaaatcaa 564

                                                                       
Query: 365 taaataagattgcactcaccacctcatacaattttttaccagtcgggggcacagctatcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaataagattgcactcaccacctcatacaattttttaccagtcgggggcacagctatcc 624

                                                                       
Query: 425 aattaggatttgagatttgctgaacatttattaccggtttccaatttattcagagaaaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aattaggatttgagatttgctgaacatttattaccggtttccaatttattcagagaaaac 684

                                                                       
Query: 485 ttttggagacccatttggtagaagcaataagtattgcattaatgtaaatcagtattgact 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttggagacccatttggtagaagcaataagtattgcattaatgtaaatcagtattgact 744

                                             
Query: 545 ctgctgtgcactgcagtgaggaatttggtgccca 578
            |||||||||||||||||||||||| ||||||||
Sbjct: 745 gtgctgtgcactgcagtgaggaattcggtgccca 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)