Query= MSMg01no480_g11.b1 MSMg01no480_g11.b1 CHROMAT_FILE:
MSMg01no480_g11.b1 PHD_FILE: MSMg01no480_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:41 2005
(569 letters)
>mm_chr8_54759307_54760276
Length = 970
Score = 998 bits (516), Expect = 0.0
Identities = 542/551 (98%), Gaps = 3/551 (0%)
Strand = Plus / Minus
Query: 21 agactgatgcatggtgcctgagcacaggtaatcagctacatagtagaatttagatttaaa 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 agactgatgcatggtgcctgagcacaggtaatcagctacatagtagaatttagatttaaa 911
Query: 81 aaattggttatcttaagttatgattctaggcatcaaagagcctagctttatggccaaggt 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 aaattggttatcttaagttatgattctaggcatcaaagagcctagctttatggccaaggt 851
Query: 141 atatacaaatatattttgagtctgagtcttatttctggaagcaaggggctaagaggaaga 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 atatacaaatatattttgagtctgagtcttatttctggaagcaaggggctaagaggaaga 791
Query: 201 gtcagtccccaacttcaacacatccccagtggttcaacnaatcattatctcctaatagaa 260
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 790 gtcagtccccaacttcaacacatccccagtggttcaactaatcattatctcctaatagaa 731
Query: 261 ggggtattttctatttttctatttaatctctctcttcaagaatatttatactaaacttta 320
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 730 gggatattttctatttttctatttaatctctttcttcaagaatatttatactaaacttta 671
Query: 321 tttttacattgagttctgacctatattaagactagcagtagttaataaacaaacaaacaa 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tttttacattgagttctgacctatattaagactagcagtagttaataaacaaacaaacaa 611
Query: 381 acaaaaa-atcttcacagatgggaactagagaatggttgcaaaatccattttttttaaa- 438
| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 610 a-aaaaacatcttcacagatgggaactagagaatgattgcaaaatccattttttttaaaa 552
Query: 439 caagaatgatcccaatgccattaaaaaatggaaaacacgtagcccacagcacacagttac 498
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 551 caaggatgatcccaatgccattaaaaaatggaaaacacgtagcccatagcacacagttac 492
Query: 499 tcatattatcaccttcagtcacttgaaataaactgcctgtccaaggaaaggttttgacag 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcatattatcaccttcagtcacttgaaataaactgcctgtccaaggaaaggttttgacag 432
Query: 559 atgaaatgact 569
|||||||||||
Sbjct: 431 atgaaatgact 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_g11.g1 MSMg01no480_g11.g1 CHROMAT_FILE:
MSMg01no480_g11.g1 PHD_FILE: MSMg01no480_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:41 2005
(264 letters)
>mm_chr8_54591118_54591781
Length = 664
Score = 487 bits (252), Expect = e-142
Identities = 261/264 (98%)
Strand = Plus / Plus
Query: 1 ataagaagaaaggcaataattctcagagtttctgagaataggactacttcgactttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagaagaaaggcaataattctcagagtttctgagaataggactacttcgactttaaaa 260
Query: 61 tcactgttctcattcatggtctgagcctgctttgggacctgggaaaccataaagacagtc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tcactgttctcattcatggtctgagcctgctttgggacctgggaaatcataaagacagtc 320
Query: 121 agctgtatgaaaaggatcgccaccgtatattagtgtctctttattctcccgactctcttg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 agctgtatgaaaaggatcgccaccatatattagtgtctctttattctcccgactctcttg 380
Query: 181 cctatactttgccattagcaacaacacaaatacatttcacatcaaacaagtagattccct 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccatactttgccattagcaacaacacaaatacatttcacatcaaacaagtagattccct 440
Query: 241 ctgcagctttcagcttttatgtta 264
||||||||||||||||||||||||
Sbjct: 441 ctgcagctttcagcttttatgtta 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
