Query= MSMg01no480_p03.b1 MSMg01no480_p03.b1 CHROMAT_FILE:
MSMg01no480_p03.b1 PHD_FILE: MSMg01no480_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:24 2005
(682 letters)
>mm_chr8_75982639_75983720
Length = 1082
Score = 1251 bits (647), Expect = 0.0
Identities = 671/679 (98%), Gaps = 2/679 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttat-ttccatgtcctttgcatatcttccttgaagaagtctattcaattcat 63
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttatattct-tgtcctttgcatatcttccttgaagaagtctattcaattcat 263
Query: 64 ttatttgcatgccttctttgaagaaattgctattcaaatcatttgtccactaatgagcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttatttgcatgccttctttgaagaaattgctattcaaatcatttgtccactaatgagcaa 323
Query: 124 gttaggttttcatatattttgttatcaaggggcttatttatatgttttggatattaactc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttaggttttcatatattttgttatcaaggggcttatttatatgttttggatattaactc 383
Query: 184 tttatgagatacatggtttaccaacatttttctctcatctagaatgtagcctttctttat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttatgagatacatggtttaccaacatttttctctcatctagaatgtagcctttctttat 443
Query: 244 aatatgctatgaagtttggtagtatgcggtctccaggtttgttttttcttaagattatgt 303
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatatgctatgaagtttggaagtatgcggtctccaggtttgttttttcttaagattatgt 503
Query: 304 tgaatacttggggccttttatagatctaaattttaggagtacccatcaactttatttaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaatacttggggccttttatagatctaaattttaggagtacccatcaactttatttaaa 563
Query: 364 aagtttctgagatttaataaggaccacgattgatctagaaatcactgtggacaaataaat 423
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaatttctgggatttaataaggaccacgattgatctagaaatcactgtggacaaataaat 623
Query: 424 attttaatataatttcaaatatgctatgctatgccttcatatagtattcatatctatcct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attttaatataatttcaaatatgctatgctatgccttcatatagtattcatatctatcct 683
Query: 484 ctttcaacaaagtgttgtagtttgcaactgatacatctttggcttctttgctaattatgg 543
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 684 ctttcaacaaagtgttgtagtttgcaactgatacatctttagcttctttgctaattatgg 743
Query: 544 tattatttttaggcaaggatcatttctcacctctttctcggttctcacagttgttgttgg 603
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 744 tattatttttaggcaaggatcatttctcacctctttctcagttctcacagttgttgttgg 803
Query: 604 tagtagatgttccttggcttatgtctaaatgtctcctgactactgcttccttcaccttgt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tagtagatgttccttggcttatgtctaaatgtctcctgactactgcttccttcaccttgt 863
Query: 664 attcttttcctccatgagt 682
|||||||||||||||||||
Sbjct: 864 attcttttcctccatgagt 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_p03.g1 MSMg01no480_p03.g1 CHROMAT_FILE:
MSMg01no480_p03.g1 PHD_FILE: MSMg01no480_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:24 2005
(396 letters)
>mm_chr8_76146764_76147559
Length = 796
Score = 758 bits (392), Expect = 0.0
Identities = 395/396 (99%)
Strand = Plus / Minus
Query: 1 agggtactgcagaggattccacatccatctagacactctccacagtcatgttgcatgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agggtactgcagaggattccacatccatctagacactctccacagtcatgttgcatgtgt 537
Query: 61 tacaaagggatacaatatttcctcctttaaacctatttagaatacactgtaattgcacct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 536 tacaaagggatacaatatttcctcctttaaacctatttagaatacactgtaattccacct 477
Query: 121 tcatattgattctctagaaatgttcaaatatttacaagactctaagttacttcacctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcatattgattctctagaaatgttcaaatatttacaagactctaagttacttcacctctt 417
Query: 181 gcaagggcaggacaatgacagtgaaatcaatcagcatataatatgatcttcagtgatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gcaagggcaggacaatgacagtgaaatcaatcagcatataatatgatcttcagtgatgct 357
Query: 241 catagaagggagccagagcatcttatcagggagttcttaatttttctgggaaaattatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 catagaagggagccagagcatcttatcagggagttcttaatttttctgggaaaattatgt 297
Query: 301 gacagctagcctttcaacgataattaatgttactctagagtgtagagtggtaaaggatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gacagctagcctttcaacgataattaatgttactctagagtgtagagtggtaaaggatag 237
Query: 361 gtgaggaagaatgaactttaaagttagagccacata 396
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gtgaggaagaatgaactttaaagttagagccacata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
