TTTTTTTTTNCATGACGCTTCTCCCGCGTGTGCCCCTTGTTTTCCCTCCC
CCTCTGTCCCCCGCTTCTCCTCTCTCCTTCCTATCCCTCCCCGGGCGGTG
GGGGGGGGGCCTCNTGGGCGGGCCCTAATAAATTGGGCGGGCCGGCCTAA
ATCCGAACCTCACTATGGTCCGAGGATCCCGCGGGAATTTCTCACCTGGT
GTGGCCCTACCGGAATGGGCAGAAGGAAAGGCACCCCTGGGAAAAAAATG
GTTCCAACCATCCCTTTAAATCCATCAGGGGAAAAAGGGCCCAAAATTCC
AAAACCCACCCCCTGAAGATTTCCCACCCTCACACCCCCGGGTTCCGGAA
TGGGGCCCTTTAAGGATCCCAAAAAATTTCCCGGGGGGGACCGGGCCCCA
GAAAGGGGCCCTGGGGGGCCTTGGGGGGAAATGGGGGGGGGGGGAGGGGA
AAAGGGGGGGGGGGGAATNANACCGCCCCCCCCTTCCNCCCAATTTTGGG
GGTTCAGGGGGGTCTGGGGGGG

CAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCCAGTAATCACAAGTGTAAGAAACTGTATT
TATAAAATAGGAGATAAAGGAAAGTTTGCTATAGATGCAGATATCAGAGC
CACAGGTGAAAGCTCAAATCTTGGATACTGACTAAAGTTGTTTGAGGCAC
AAGCAAAATGCCCTGACGGAAAGACCTCCCGTTCCAATCAGATTCTTCCA
TTGTGTGAATACAACCTTGAAACTGGGAAAATTTGCCAACGAAACAACAT
TACTTCATGACATATGAAAAGTAACAAAAACATAAGGTGAAATATGTATA
GCAAATATGTCAAGGATAGGCTGCATTTCCTAGAGATGTGTACTTTTTTT
TTAAGATAAGAAAAAATAGGCTTGTGAAGGTCTTTAGAAGAATAGTTCAC
GTGGAGGAGATAGTAAGTGTAAGTACCTGATGATAGATAAAGGTTAATTG
CAGGTAAACAACAGATAGGTAACCAGTATTGCTAGAACACAGTGTGAAGG
GAACGCTGGGGTCCTTAACAGGGAGGCTGAAAAAGAGAAAGGCTGCAAAC
ATGACCAAGAAGCAAAGCCCTTTGTGCACGGTGCCCTACACAGGATTGTT
CTCAGAGCGACAGGTGCTCACTGAAAATGAATTTCTAGGGCCATTGTAAA
TTCAGATTATTGTTTTGAAAATATTGCTCCAGCTGTGCAGAAGAAAGAAA
GAGGCTAAAGAN

Query= MSMg01no481_j16.g1 MSMg01no481_j16.g1 CHROMAT_FILE:
MSMg01no481_j16.g1 PHD_FILE: MSMg01no481_j16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:18 2005
         (635 letters)



>mm_chr8_100587630_100588664
          Length = 1035

 Score = 1220 bits (631), Expect = 0.0
 Identities = 634/635 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccagtaatcacaagtgtaagaaactgtatttataaaataggagataaaggaaagtttgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagtaatcacaagtgtaagaaactgtatttataaaataggagataaaggaaagtttgct 260

                                                                       
Query: 61  atagatgcagatatcagagccacaggtgaaagctcaaatcttggatactgactaaagttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagatgcagatatcagagccacaggtgaaagctcaaatcttggatactgactaaagttg 320

                                                                       
Query: 121 tttgaggcacaagcaaaatgccctgacggaaagacctcccgttccaatcagattcttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgaggcacaagcaaaatgccctgacggaaagacctcccgttccaatcagattcttcca 380

                                                                       
Query: 181 ttgtgtgaatacaaccttgaaactgggaaaatttgccaacgaaacaacattacttcatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgtgaatacaaccttgaaactgggaaaatttgccaacgaaacaacattacttcatga 440

                                                                       
Query: 241 catatgaaaagtaacaaaaacataaggtgaaatatgtatagcaaatatgtcaaggatagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catatgaaaagtaacaaaaacataaggtgaaatatgtatagcaaatatgtcaaggatagg 500

                                                                       
Query: 301 ctgcatttcctagagatgtgtactttttttttaagataagaaaaaataggcttgtgaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgcatttcctagagatgtgtactttttttttaagataagaaaaaataggcttgtgaagg 560

                                                                       
Query: 361 tctttagaagaatagttcacgtggaggagatagtaagtgtaagtacctgatgatagataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctttagaagaatagttcacgtggaggagatagtaagtgtaagtacctgatgatagataa 620

                                                                       
Query: 421 aggttaattgcaggtaaacaacagataggtaaccagtattgctagaacacagtgtgaagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggttaattgcaggtaaacaacagataggtaaccagtattgctagaacacagtgtgaagg 680

                                                                       
Query: 481 gaacgctggggtccttaacagggaggctgaaaaagagaaaggctgcaaacatgaccaaga 540
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaatgctggggtccttaacagggaggctgaaaaagagaaaggctgcaaacatgaccaaga 740

                                                                       
Query: 541 agcaaagccctttgtgcacggtgccctacacaggattgttctcagagcgacaggtgctca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcaaagccctttgtgcacggtgccctacacaggattgttctcagagcgacaggtgctca 800

                                              
Query: 601 ctgaaaatgaatttctagggccattgtaaattcag 635
           |||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgaaaatgaatttctagggccattgtaaattcag 835


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)