Query= MSMg01no481_n22.b1 MSMg01no481_n22.b1 CHROMAT_FILE:
MSMg01no481_n22.b1 PHD_FILE: MSMg01no481_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:38 2005
(632 letters)
>mm_chr8_125750371_125751402
Length = 1032
Score = 1207 bits (624), Expect = 0.0
Identities = 630/632 (99%)
Strand = Plus / Minus
Query: 1 ttggagggtgacaatgacctccctagaggacaggggcaaaagggttgggagagaatatac 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 832 ttggagggtgacaatgacctccctagaggacaggggcaaaagggtttggagagaatatac 773
Query: 61 aattttacagctggccaaggtgaggaaggtctggaaggactcagggagctcaggttccgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aattttacagctggccaaggtgaggaaggtctggaaggactcagggagctcaggttccgg 713
Query: 121 ctgcggtgacagactgtggtgacaggctgggccagctccctaactgcaatgcacacgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ctgcggtgacagactgtggtgacaggctgggccagctccctaactgcaatgcacacgccc 653
Query: 181 tccgtagcgtcagtcctgaggaacctcagatgacctgtgcttgtgcgcctccctgcttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tccgtagcgtcagtcctgaggaacctcagatgacctgtgcttgtgcgcctccctgcttgg 593
Query: 241 atgcccgagcaggcatggtactcctgcatcctgcccccagcttaccatccttctctttgt 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 atgcccgagcaggcagggtactcctgcatcctgcccccagcttaccatccttctctttgt 533
Query: 301 ccatccgcaccttcttcagggcgacaatttcatctgtctgggtatccctggcccgatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ccatccgcaccttcttcagggcgacaatttcatctgtctgggtatccctggcccgatctg 473
Query: 361 aaacaggagcacacatgcaatggagcctacctcaaaccatcaaactctcttaagagtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aaacaggagcacacatgcaatggagcctacctcaaaccatcaaactctcttaagagtttg 413
Query: 421 ctgaaattcttctttttctctgacaacataatgtccagcaacacttggtccttcttccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctgaaattcttctttttctctgacaacataatgtccagcaacacttggtccttcttccgt 353
Query: 481 tcccaagatgtgagcttgggaattctcatttgagctgggttgggagttagtggaaacctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tcccaagatgtgagcttgggaattctcatttgagctgggttgggagttagtggaaacctg 293
Query: 541 gccatcagcaactcaagtggagaggagctctccaagcaatctctcacacagcctactgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gccatcagcaactcaagtggagaggagctctccaagcaatctctcacacagcctactgct 233
Query: 601 ctgagttcacttatgcaatattacagcaccac 632
||||||||||||||||||||||||||||||||
Sbjct: 232 ctgagttcacttatgcaatattacagcaccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_n22.g1 MSMg01no481_n22.g1 CHROMAT_FILE:
MSMg01no481_n22.g1 PHD_FILE: MSMg01no481_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:39 2005
(602 letters)
>mm_chr8_125551186_125552187
Length = 1002
Score = 1091 bits (564), Expect = 0.0
Identities = 594/604 (98%), Gaps = 3/604 (0%)
Strand = Plus / Plus
Query: 1 agggcagccaaggcttcaacagagaaatcctgtcttgaaaaaccaattaacaaacaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agggcagccaaggcttcaacagagaaatcctgtcttgaaaaaccaattaacaaacaagca 259
Query: 61 agaataaaatatactca-aaaccggaattagtatcaggatagtcatgttagtgcatgcct 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaataaaatatactcagaaaccggaattagtatcaggatagtcatgttagtgcatgcct 319
Query: 120 atggctcacaagttcacggtctctctgggcattttaggttaagactctaattcaaaataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atggctcacaagttcacggtctctctgggcattttaggttaagactctaattcaaaataa 379
Query: 180 aaggctgagccgggcgtgatggcgcacgcctttaatctcagcgcttgggaggcagaggca 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 aaggctgagccgggcgtgatggcgcacgcctttgatctcagcgcttgggaggcagaggca 439
Query: 240 ggcggatttctgattttgaggccagcctggtctacagagtgagttccaggacagccaggg 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcggatttctgagtttgaggccagcctggtctacagagtgagttccaggacagccaggg 499
Query: 300 ctacacagagaaaccctgtctcaaaacaaaaacaaacaaacaaacaaaaataaaaggctg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atacacagagaaaccctgtctcaaaacaaaaacaaacaaacaaacaaaaataaaaggctg 559
Query: 360 gggatacatggctcaatactaaagcaaaaaaccctaaaagtactagaaaggaagaggaag 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 560 gggatacatggctcaatactaaagcaaaaaaccccaaaagtactagaaaggaagaggaag 619
Query: 420 aaggaattaacacaagcatcaactattcatagtgagagac-tactactctgagtcacatg 478
||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 620 aaggaattaacacgagcatcaactattcatagtgagagacgt-ctactctgagtcacatg 678
Query: 479 ctaggcttgagtcacaatgtgaatgtggaatctgatcctcatcaatgagtttctgtattt 538
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 679 ctaggcttgagtcacaatgtgaatgcggaatctgatcctcatcaatgcgtttctgtattt 738
Query: 539 ctcttttgttaatcactggaagggggagagggcggcagagataaggtgcacatcttgcta 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctcttttgttaatcactggaagggggagagggcggcagagataaggtgcacatcttgcta 798
Query: 599 tcag 602
||||
Sbjct: 799 tcag 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
