Query= MSMg01no484_c21.b1 MSMg01no484_c21.b1 CHROMAT_FILE:
MSMg01no484_c21.b1 PHD_FILE: MSMg01no484_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:38 2005
(682 letters)
>mm_chr8_115560602_115561683
Length = 1082
Score = 1245 bits (644), Expect = 0.0
Identities = 671/680 (98%)
Strand = Plus / Minus
Query: 3 gaattcactgacttttcaatgctagctctctaagttcctatcatttttaaagatgtcttg 62
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 gaattcactgacttctaaacgctagctctctaagttcctatcatttttaaagatgtcttg 823
Query: 63 attaagacataggagggaattaagcatattcaagttagattaatgaaatactgattcgaa 122
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 attaagacataggatggaattaagcatattcaagttagattaatgaaatactgattcgaa 763
Query: 123 tcaagcatatcttacaatattgagaatttcttcatattgacttcctttccttaaaattca 182
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 762 tcaagcatatcttacaatattgagaatttcttcatattgacttccttcccttaaaattca 703
Query: 183 tgttccttattccttgtgtttaatgtgattattttacagaaaatactcagatagcatgtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tgttccttattccttgtgtttaatgtgattattttacagaaaatactcagatagcatgtt 643
Query: 243 atagaactacacatgtggctgccttctatccgtatctatattttgaaattatgttttcat 302
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 642 atagaactacacatgtggctgccttctatccgtagcaatattttgaaattatgttttcat 583
Query: 303 tttccatcaactcatttttcggagagaaaaatgtgtatattgccatcattataacactgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tttccatcaactcatttttcggagagaaaaatgtgtatattgccatcattataacactgc 523
Query: 363 aggttttgaaacactattgagagtgaagtgctggccttgacaaaaataaatgtttctaac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aggttttgaaacactattgagagtgaagtgctggccttgacaaaaataaatgtttctaac 463
Query: 423 aaatgacatactttgaattttcctttcaactgaatttgtatttttattttacatttttta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaatgacatactttgaattttcctttcaactgaatttgtatttttattttacatttttta 403
Query: 483 ttctcacatgatgttatgaaatagatacaccgagtagttatactgaattcagcctgccaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttctcacatgatgttatgaaatagatacaccgagtagttatactgaattcagcctgccaa 343
Query: 543 taaactaaatgaaatttttaggcgcttcaactagaaacatcatccaagttaaaaagcaaa 602
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 342 taaactaaatgaaaattttaggcgcttcatctagaaacatcatccaagttaaaaagcaaa 283
Query: 603 cacctttgctggtggcatcattgaacaaatggctgacagcagcagatcagcattattgat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cacctttgctggtggcatcattgaacaaatggctgacagcagcagatcagcattattgat 223
Query: 663 ttcatttgacaagcacaaaa 682
||||||||||||||||||||
Sbjct: 222 ttcatttgacaagcacaaaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_c21.g1 MSMg01no484_c21.g1 CHROMAT_FILE:
MSMg01no484_c21.g1 PHD_FILE: MSMg01no484_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:39 2005
(593 letters)
>mm_chr8_115394721_115395713
Length = 993
Score = 1056 bits (546), Expect = 0.0
Identities = 582/594 (97%), Gaps = 3/594 (0%)
Strand = Plus / Plus
Query: 1 tgtgaaaattcccaagctaatttaaaattgcagatattgaagggggattcccccccccac 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 202 tgtgaaaattcccaagctaatttaaaattgcagatattgaaggggg-ttcccccccg-ac 259
Query: 61 tctgtggggctggagaggttgctcagtggtgaagaatagttgcttctctcttcaaggacc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 260 tctgtggggctggagaggttgctcagtggtgaagaatagttgcttctctcttcaagtacc 319
Query: 121 tgagtttagttcccagcatccacactgggcagctcatagccacctgtaactcatgttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgagtttagttcccagcatccacactgggcagctcatagccacctgtaactcatgttcac 379
Query: 181 atatccacatgcagacacacacctacacataataaaagataataaaaa-taaatatgttt 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 atatccacatgcagacacacacctacacataataaaagataataaaaaataaatatgttt 439
Query: 240 taaaaagaaaaggatttactgatttactgtgtcctctgcagaatattgaaagaaaataac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaaaagaaaaggatttactgatttactgtgtcctctgcagaatattgaaagaaaataac 499
Query: 300 ccagagaaagcaaaagatagactcacagaagtatcagatacattgaaaggaagaaataga 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccagggaaagcaaaagatagactcacagaagtatcagatacattgaaaggaagaaataga 559
Query: 360 gtctgatgtttagtagtgacctctacatataaaggggaaaacacccccatagaaagaggc 419
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 560 gtctgatgtttagtagtgacctctacatataatggggaaaacaccctcatagaaagaggc 619
Query: 420 attactacagtcatcacaaaaggtaacccaatccctaatggacatacattcagtgaattg 479
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 actactacagtcatcacaaaaggtaacccaatccctaatggacatacattcagtgaattg 679
Query: 480 tccaggttacttactgcatggaacaccagtcgtttctattcccatatttactatgtggtc 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 680 tccaggttacttactgcatggaacaccagtcgtttctattcccatatttactatgtggcc 739
Query: 540 tctcactaaattgtatggtaccctaacagcaggggactcctttctcccttctta 593
||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tctcactgaagtgtatggtaccctaacagcaggggactcctttctcccttctta 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
