NNNNCCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCACCTGAGGTATACCGAATGGCTGAGAAGCACTTGAAA
AAATGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCATCTTACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATATGGAGAAAGAGGAACACTCCTCCATTGT
TGCTGGCATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTT
CCTCAGAAAATTGGACATAGTACTACTGGAGGATCCCGCAATACCTCTCC
TGGGCATATATCCAGAAGATATCCCAACCGGTAAGAAGGACACATACTCC
ACTATGTTCATAGAAGCCTTATTTATAATAGCCAGAAGCTAGAAAGAACC
CAGATGTCCCTCAACAGAGGAATGGATACAAAAATATGGTACATTTACAC
AATGAAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
GTAGATTGTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCA
AAAAAGAACTCAAATGATATGTACTCACTGATAAGTGTATATTAGCCCAG
AAACTTAGTATACCCAAGATATAAGATACAGTTTGCAAAACACTTCAATC
TGAAGAAGAATGAACACCAAAGTTTGGACACTTTGCCCCTTCN

GACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTCCTTCAGTGTAAGTGCATTCCCAATA
AAATTTATTGAGTGAAACAATCTTTGTACAACTACTAGTCATGCATCATC
AGTAATTTTACAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTTTCT
GTGGCATGATTATGCATTCTGTAATATTAATTTGGGGGTCCTTTTGCTTT
TTAACACTTAGATTATCTTAATGGTTCAACATTTTTCTGATATATGCAGT
ATTAAAGATATTGAGCAAAAGTATTAATGGGCTTCTTTAAATTCTATATT
ATAGTGTTTCAGTTCTGTGTCTACAGTGTGTGATGATTTTTAAAACTGTC
TTTTAAATTTATGTAATGATGTTGACATTTTGACTTTTATTTCTGGTTTT
AGAGTTTGTATTTTCATGGAGTGCTTTGTAGCAGGCATTACAAGTAATCT
GTTTTGTACATAAATGTGCCAACAGCTTGATGGTGGCGTTTTTGAAATGT
AGAACAAAGTGCTTGCAAAATGTAATAAATACACTTGTGTACTTTGTGTA
CTTATTCTTAGTTTCTGCAGTGGTTTCTGTTTGTCTTGTTCATTCCTCAC
CTTGTGTGTGTAGTCTTTTCAAGGCAGTAGGGTCCCACCTGGGGAAGATT
CTTATTTCAGTTGAGGGGATCTGACCCTTCAACATTTAGAAAAAAAAATT
TGAGTGTGAACAT

Query= MSMg01no486_a22.g1 MSMg01no486_a22.g1 CHROMAT_FILE:
MSMg01no486_a22.g1 PHD_FILE: MSMg01no486_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:15 2005
         (685 letters)



>mm_chr8_56145494_56146578
          Length = 1085

 Score = 1317 bits (681), Expect = 0.0
 Identities = 684/685 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctccttcagtgtaagtgcattcccaataaaatttattgagtgaaacaatctttgtacaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccttcagtgtaagtgcattcccaataaaatttattgagtgaaacaatctttgtacaac 260

                                                                       
Query: 61  tactagtcatgcatcatcagtaattttacaagttcttgtagtaggtagggggtattacta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactagtcatgcatcatcagtaattttacaagttcttgtagtaggtagggggtattacta 320

                                                                       
Query: 121 gcgtttctgtggcatgattatgcattctgtaatattaatttgggggtccttttgcttttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgtttctgtggcatgattatgcattctgtaatattaatttgggggtccttttgcttttt 380

                                                                       
Query: 181 aacacttagattatcttaatggttcaacatttttctgatatatgcagtattaaagatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacacttagattatcttaatggttcaacatttttctgatatatgcagtattaaagatatt 440

                                                                       
Query: 241 gagcaaaagtattaatgggcttctttaaattctatattatagtgtttcagttctgtgtct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcaaaagtattaatgggcttctttaaattctatattatagtgtttcagttctgtgtct 500

                                                                       
Query: 301 acagtgtgtgatgatttttaaaactgtcttttaaatttatgtaatgatgttgacattttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagtgtgtgatgatttttaaaactgtcttttaaatttatgtaatgatgttgacattttg 560

                                                                       
Query: 361 acttttatttctggttttagagtttgtattttcatggagtgctttgtagcaggcattaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttttatttctggttttagagtttgtattttcatggagtgctttgtagcaggcattaca 620

                                                                       
Query: 421 agtaatctgttttgtacataaatgtgccaacagcttgatggtggcgtttttgaaatgtag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtaatctgttttgtacataaatgtgccaacagcttgatggtggcgtttttgaaatgtag 680

                                                                       
Query: 481 aacaaagtgcttgcaaaatgtaataaatacacttgtgtactttgtgtacttattcttagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacaaagtgcttgcaaaatgtaataaatacacttgtgtactttgtgtacttattcttagt 740

                                                                       
Query: 541 ttctgcagtggtttctgtttgtcttgttcattcctcaccttgtgtgtgtagtcttttcaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttctgcagtggtttctgtttgtcttgttcattcctcaccttgtgtgtgtagtcttttcaa 800

                                                                       
Query: 601 ggcagtagggtcccacctggggaagattcttatttcagttgaggggatctgacccttcaa 660
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggcagtaggatcccacctggggaagattcttatttcagttgaggggatctgacccttcaa 860

                                    
Query: 661 catttagaaaaaaaaatttgagtgt 685
           |||||||||||||||||||||||||
Sbjct: 861 catttagaaaaaaaaatttgagtgt 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)