Query= MSMg01no486_h22.b1 MSMg01no486_h22.b1 CHROMAT_FILE:
MSMg01no486_h22.b1 PHD_FILE: MSMg01no486_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:49 2005
(634 letters)
>mm_chr8_59939771_59940805
Length = 1035
Score = 1114 bits (576), Expect = 0.0
Identities = 620/637 (97%), Gaps = 6/637 (0%)
Strand = Plus / Plus
Query: 1 aaatgaaaatagtaagggtagtctttaccagcaactccactccacatgtgtatgtgtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgaaaatagtaagggtagtctttaccagcaactccactccacatgtgtatgtgtgta 260
Query: 61 tactatataatgcatacattatatattctaaagtataacatagttttatataaatgtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactatataatgcatacattatatattctaaagtataacatagttttatataaatgtaaa 320
Query: 121 tatatatacacatatgaatatatttatcacctcatacca-atcaaagcaatgcaatgtgt 179
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 321 catatatacacatatgaatatatttatcacttcataccagatcaaagcaatgcaatgtgt 380
Query: 180 ggctcatatctgttgaatgaacaacaggctaaaagcacatttttatcttgggcaaggacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctcatatctgttgaatgaacaacaggctaaaagcacatttttatcttgggcaaggacc 440
Query: 240 cgtagaagtctcactttatgccttttgtgtgtatgtatatgcatgtgcccatgtacatga 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtagaagtctcactttatgccttttgtgtgtatgtatatgcatgtgcccatgtacatga 500
Query: 300 cctgagtacagagaaggacattgggcatgccatctaccactctcctcattactctcttaa 359
||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 cctgagttcagaggaggacattgggcatgccatccaccactctcctcattactctcttaa 560
Query: 360 gacagggtctctccaccatgagaacaggacccacagaacaactggctgggactcgtggga 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 gacagggtctctccaccatgagaacacgacccacagaacaactggctgggactcgtggga 620
Query: 420 actggcagagatcagggagtcagtagggccctgacctgngtcctctgcacatgtgttata 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 actggcagagatcagggagtcagtagggccctgacctgggtcctctgcacatgtgttata 680
Query: 480 gctgagtagattggtgttcttgtgagaatcctaacagtgggagcaggggctgtgcctgac 539
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 gctgagtagattggtgttcttgtgagaatcctaacagtggaagcaggggctgtgcctgac 740
Query: 540 tctgttcca-acttgtaggacccttttcactcctgggttgccttgtccagccttgatgta 598
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 tctgttccctacttgtaggacccttttcactcctgggttgccttgtccagccttgacgta 800
Query: 599 atgacatgtgcctggacttactgta----gcttgcta 631
||||||||||||||||||||||||| ||||||||
Sbjct: 801 atgacatgtgcctggacttactgtatgtagcttgcta 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_h22.g1 MSMg01no486_h22.g1 CHROMAT_FILE:
MSMg01no486_h22.g1 PHD_FILE: MSMg01no486_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:49 2005
(616 letters)
>mm_chr8_60102592_60103608
Length = 1017
Score = 1185 bits (613), Expect = 0.0
Identities = 616/617 (99%), Gaps = 1/617 (0%)
Strand = Plus / Minus
Query: 1 ttatgttgaaaggtatttgaaatgttcaagatggaaacgtttcatatgttcctcaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ttatgttgaaaggtatttgaaatgttcaagatggaaacgtttcatatgttcctcaaggtc 758
Query: 61 tgaggagagagattggaatgggagccatgatcatttggtagcatgaaaattattgatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tgaggagagagattggaatgggagccatgatcatttggtagcatgaaaattattgatgtt 698
Query: 121 tggttgtcatgaagacagcttggcattaacagtgctgtagtagtgcaggaactggcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tggttgtcatgaagacagcttggcattaacagtgctgtagtagtgcaggaactggcctaa 638
Query: 181 ccctagagccacttccttggctacagtttgctgtgatccataaatgctatctttactgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ccctagagccacttccttggctacagtttgctgtgatccataaatgctatctttactgcc 578
Query: 241 ttctggtgtttaaccagtaggtttattcatacagaaatctgttctttgctaagatggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttctggtgtttaaccagtaggtttattcatacagaaatctgttctttgctaagatggtta 518
Query: 301 ggggttcacttgaaagctgtatgtatttcagagaagctggagtttttaaggtcttcttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggggttcacttgaaagctgtatgtatttcagagaagctggagtttttaaggtcttcttat 458
Query: 361 ttctcgccccctcctttccctttctctttcttttctttcgtttctgtttttcctggtaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttctcgccccctcctttccctttctctttcttttctttcgtttctgtttttcctggtaag 398
Query: 421 gaaacagaatgaacaaccatctgggcctgtgaggatgctgtggcagatctctaactccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gaaacagaatgaacaaccatctgggcctgtgaggatgctgtggcagatctctaactccac 338
Query: 481 aagatttctccaagcacattatgaaaagtgagcgtttgactcactactaagctctgtcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagatttctccaagcacattatgaaaagtgagcgtttgactcactactaagctctgtcct 278
Query: 541 tccccagctttttataaacagaatagagctgctctacggggcttctataacctggatttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tccccagctttttataaacagaatagagctgctctacggggcttctataacctggatttc 218
Query: 601 tt-aaaatacatttcta 616
|| ||||||||||||||
Sbjct: 217 ttaaaaatacatttcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space: 610242
Effective search space used: 610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
