Query= MSMg01no488_e02.b1 MSMg01no488_e02.b1 CHROMAT_FILE:
MSMg01no488_e02.b1 PHD_FILE: MSMg01no488_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:07 2005
(640 letters)
>mm_chr8_66705733_66706774
Length = 1042
Score = 1139 bits (589), Expect = 0.0
Identities = 625/637 (98%), Gaps = 4/637 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgttcagctctgagccccattctgataaacagcttcagtgaagtagctgttc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgttcagttctgagccccattctgataaacagcttcagtgaagtagctgttc 264
Query: 65 ttagtttttattgaaagcaaatgagatattttttaacagttgctggtattatcttcagct 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagtttttactgaaagcaaatgagatattttttaacagttgctggtattatcttcagct 324
Query: 125 ttgtccaatcagtggactctgaattttctccattaatagtcataatcacttgaagatatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtccaatcagtggactctgaattttctccattaatagtcataatcacttgaagatatt 384
Query: 185 aggctctaatactcaaaaacctttttaaagacaatatatgacttttgaatctttcataat 244
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 385 aggctctaatactcaaaaacctttttaaagacaatatatgactttagaatcttttataat 444
Query: 245 gtccattaatgggaggggg-taacttccctaaaatatatccagtggactacgattaaata 303
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtccattaatggggggggggtaacttccctaaaatatatccagtggactacgattaaata 504
Query: 304 actctgggactatctgtttcataaaatggagttgttggtacttcttgtcacctagattta 363
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 actctgggactatctgtttcataaaatggagttgttggtacttcttgttacctagattta 564
Query: 364 tgttctggacattctatcatagaatcatcagagaaaaga-gaatcactctttcctcagta 422
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 565 tgttctggacattctatcatagaatcatcagagaaaagaaga-tcactctttcctcagta 623
Query: 423 gaaatgtgacccatatccacatcattgattcc-tatcagcagatgggaccaccacagtat 481
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 624 gaaatgtgacccatatccacatcattgatttcgtatcagcagatgggaccaccacagtat 683
Query: 482 tgataagtgaggtaagctgcacacttgactgatagaatactggcagtcaagttgtaatgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgataagtgaggtaagctgcacacttgactgatagaatactggcagtcaagttgtaatgt 743
Query: 542 tgcagccatgacatttgctgaaagggtgataagatgtttcacaacaaatggcatgccttt 601
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 744 tgcagccatgacatttgctgaaagggtgataagatgtttcacaacaaatgtcatgccttt 803
Query: 602 aaaactagaacacatcaaacctaagttgtcttatgtc 638
|||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaaactagaacacatcaaacctaagttgtcttatgtc 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1042
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1032
Effective search space: 650160
Effective search space used: 650160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_e02.g1 MSMg01no488_e02.g1 CHROMAT_FILE:
MSMg01no488_e02.g1 PHD_FILE: MSMg01no488_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:07 2005
(585 letters)
>mm_chr8_66898484_66899468
Length = 985
Score = 1069 bits (553), Expect = 0.0
Identities = 577/585 (98%)
Strand = Plus / Minus
Query: 1 actttgtagaccaggctggccttgaacccagaaatccgcctgcctctgcctcccaagtgc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 889 actttgtagaccaggctggccttgaacccagaaatctgcctgcctctgcctcccaagtgc 830
Query: 61 tgggattaaaggcatgcgccaccatgccaggctctccatttttctttcttcagtgtatgg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tgggattataggcatgcgccaccatgccaggctctccatttttctttcttcagtgtatgg 770
Query: 121 tccagtttagtctggttgtccattactaagctttctacaggggtcttgggatcagtcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tccagtttagtctggttgtccattactaagctttctacaggggtcttgggatcagtcagg 710
Query: 181 cttggtagaaaatgtgaataatagaaagggcttatctagtttgctggcctttgttccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cttggtagaaaatgtgaataatagaaagggcttatctagtttgctggcctttgttccaag 650
Query: 241 gatttgagaggacttgattcgtaaaccaccagggactccttagtcacctttcctttgttt 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 649 gatttgagaggacttgattcgtaaaccaccagggactccttagtcgcctttcctttgttt 590
Query: 301 ttatttactaagagtgttgtcagctaaatagtttcattagatggaaagtcagttggcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttatttactaagagtgttgtcagctaaatagtttcattagatggaaagtcagttggcagt 530
Query: 361 ccagatgcaaagtactcaggaatatcggtgccttgaacggcaggccaatgtcatatggct 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 529 ccagatgcaaagtactcaggaatattggtgccttgaacggcaggccaatgtcatatggct 470
Query: 421 gaactgttagtgtcattttgaatgcgtttcaatgatgaattttccacaagcctagaattg 480
||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 469 gaactcttagtgtcattttgaatgcatttcaatgatgaattttccacaggcctagaattg 410
Query: 481 ccttctagataaaatttatacttaaaaataaaagtcacctttcatagacttaaaatctgg 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccttgtagataaaatttatacttaaaaataaaagtcacctttcatagacttaaaatctgg 350
Query: 541 cattagcaggataaacttcttatgtgaggtatattttggcgggtt 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cattagcaggataaacttcttatgtgaggtatattttggcgggtt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
