Query= MSMg01no491_c11.b1 MSMg01no491_c11.b1 CHROMAT_FILE:
MSMg01no491_c11.b1 PHD_FILE: MSMg01no491_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:58 2005
(240 letters)
>mm_chr8_90158484_90159114
Length = 631
Score = 366 bits (189), Expect = e-106
Identities = 225/237 (94%), Gaps = 9/237 (3%)
Strand = Plus / Minus
Query: 1 tgccccaangctcctgtatntgttcaacacactggtctgtactatactttggaaatactg 60
|||||||| |||||||||| ||||||||||||||| |||||| || ||||||||||||||
Sbjct: 428 tgccccaa-gctcctgtat-tgttcaacacactgg-ctgtaccat-ctttggaaatactg 373
Query: 61 gtaaattttanggagctggngaactaacctaaaggaagtggatcaccagggngagccttg 120
| ||| |||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 372 g-aaacttta-ggagctgg-gaactaacc-aaaggaagtggatcaccaggg-gagccttg 318
Query: 121 acagaattttatccctgccccacccctctccttccttcaccgtggggtgaagcttctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 317 acagaattttatccctgccccacccctctccttccttcaccgtggggtgaagcatctcag 258
Query: 181 ccttattctgatgctctgcccaagcctggggacacctctgagactctgcgtcaaaaa 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ccttattctgatgctctgcccaagcctggggacacctctgagactctgcgtcaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 631
Length adjustment: 9
Effective length of query: 231
Effective length of database: 622
Effective search space: 143682
Effective search space used: 143682
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no491_c11.g1 MSMg01no491_c11.g1 CHROMAT_FILE:
MSMg01no491_c11.g1 PHD_FILE: MSMg01no491_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:58 2005
(322 letters)
>mm_chr8_90081190_90081911
Length = 722
Score = 615 bits (318), Expect = e-180
Identities = 321/322 (99%)
Strand = Plus / Plus
Query: 1 acagcaataaaagctctataaactataccctggatgttctgaggtacatctgtatgtagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcaataaaagctctataaactataccctggatgttctgaggtacatctgtatgtagc 260
Query: 61 ccctgcacttgggaggctgagacaggaggatcttaaatatgagcccaacttgagctacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctgcacttgggaggctgagacaggaggatcttaaatatgagcccaacttgagctacat 320
Query: 121 agtgagaccctctctataagtaaataaataaatatctaagtatgcaagaagaggaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgagaccctctctataagtaaataaataaatatctaagtatgcaagaagaggaggaac 380
Query: 181 atgggacatgtatttagggaaataacacacagagaaattgtccttgagtgtctctaaatg 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgggacgtgtatttagggaaataacacacagagaaattgtccttgagtgtctctaaatg 440
Query: 241 tgtgtagcaaggacactcaaataattagagtaagtcatgttttaaattttaaataaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtagcaaggacactcaaataattagagtaagtcatgttttaaattttaaataaaacc 500
Query: 301 atatcaatagtgaagcaatgag 322
||||||||||||||||||||||
Sbjct: 501 atatcaatagtgaagcaatgag 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
