Query= MSMg01no491_c17.b1 MSMg01no491_c17.b1 CHROMAT_FILE:
MSMg01no491_c17.b1 PHD_FILE: MSMg01no491_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:59 2005
(646 letters)
>mm_chr8_114671170_114672217
Length = 1048
Score = 1093 bits (565), Expect = 0.0
Identities = 596/607 (98%), Gaps = 3/607 (0%)
Strand = Plus / Minus
Query: 42 aaaaaaaaaaccaaggctggaaagctgtctcagattgtaaagcacttgccatgcaaacag 101
|||||||||| | |||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1048 aaaaaaaaaa-cgaggctggaaagctgtctcggactgtaaagcacttgccatgcaaacag 990
Query: 102 aaagatctcagttcagttccctggagccccactcaaaagccaggcacagtggtcctcacc 161
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 aaagatctcagttcagtcccctggagccccactcaaaagccaggcacagtggtcctcacc 930
Query: 162 tgtaatctcagtctaagaggccaaaccagatgggtcctggaggcttgctggccactcagt 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tgtaatctcagtctaagaggccaaaccagatgggtcctggaggcttgctggccactcagt 870
Query: 222 ctggctaaatgggtgggcatgaggttcagtgggagacagtacctttaaaaatatttagta 281
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 869 ctggctaaatgggtgggcatgaggttcagtgggagacagtacctttaaaaatatagagta 810
Query: 282 attaaaaaggatatttgacattgacctctggcctgcatgtacatgtatacacacacacag 341
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 attaagaaggatatttgacattgacctctggcctgcatgtacatgtatacacacacacag 750
Query: 342 acacacacacacactcacacacaaactgcatagacttacaaagtctatgtctagaatatg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 acacacacacacactcacacacaaactgcatagacttacaaagtctatgtctagaatatg 690
Query: 402 caaatatctattacagctcaataacacaaagacaattaaggcttcttcaaaactt--aaa 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 689 caaatatctattacagctcaataacacaaagacaattaaggcttcttcaaaacttaaaaa 630
Query: 460 aaaaaaaaatgttttctctgtgagaagataccgctaagagaatggaaagacagttacagg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaaaaaaaatgttttctctgtgagaagataccgctaagagaatggaaagacagttacagg 570
Query: 520 acgctaaaaaatatttgtaaacactgcttccagattacataaacagctctcaagcctcaa 579
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 569 acgctaaaaaatatttgtaaacaccgcttccagattacataaacagctctcaagcctcaa 510
Query: 580 caataagaagacaagcaacgtgggttttagtgggtataacatctcactgaagaaaatgta 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 caataagaagacaagcaacgtgggttttagtgggtataacatctcactgaagaaaatgta 450
Query: 640 caagctc 646
|||||||
Sbjct: 449 caagctc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1048
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1038
Effective search space: 660168
Effective search space used: 660168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_c17.g1 MSMg01no491_c17.g1 CHROMAT_FILE:
MSMg01no491_c17.g1 PHD_FILE: MSMg01no491_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:00 2005
(626 letters)
>mm_chr8_114561061_114562086
Length = 1026
Score = 1147 bits (593), Expect = 0.0
Identities = 621/635 (97%), Gaps = 9/635 (1%)
Strand = Plus / Plus
Query: 1 atcgtgatagc--ctc------aacagactgtggctaacacagagcaaaagcaaaacaga 52
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atcgtgatagcttctcctacacaacagactgtggctaacacagagcaaaagcaaaacaga 251
Query: 53 atctgcaaattatcagagccggagcaagggcataggaaaataacacttctcatacaaatt 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atctgcaaattatcagagccggagcaagggcataggaaaataacacttctcatacaaatt 311
Query: 113 ataaaggacagttacaaagaggttccattacccttctccctaactcaattctacagaata 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ataaaggacagttacaaagaggttccattacccttctccctaactcaattctacagaata 371
Query: 173 aactccacatatgttgtcccgggaactgttaagagcgcatccacgggcagcctccaccgg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aactccacatatgttgtcccgggaactgttaagagcgcatccacgggcagcctccaccgg 431
Query: 233 cagcctcacggtggacccactcggctgccagccaggcccagatcctgtgctttgagtagg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cagcctcacggtggacccactcggctgccagccaggcccagatcctgtgctttgagtagg 491
Query: 293 tccaccccaacgttcaatccgtccatgaggtgctgaagcgggggg-aggagccgatgtgg 351
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 492 tccaccccaacgttcactccgtccatgaggtgctgaagcgggggggaggagccgatgttg 551
Query: 352 cagaaccagatccaggaaggagtcatcacgatcaaagatgaaaccctgggtcatgtctgt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cagaaccagatccaggaaggagtcatcacgatcaaagatgaaaccctgggtcatgtctgt 611
Query: 412 gattggagccagcacccgcggtagggaagcagctcaaaggagcctgagagcaacacagag 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gattggagccagcacccgcggtagggaagcagctcaaaggagcctgagagcaacacagag 671
Query: 472 gctccgagggtgacagggtggtggcagaggagtctgcggagccccacagaatccccggaa 531
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 672 gctccgagggtgacagggtggtggcagaggagtctgcggagccccgcagaatccccggaa 731
Query: 532 aagctacagaagggcggcagggccacaggaagatgtttttaaaagtagactcatgaaact 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aagctacagaagggcggcagggccacaggaagatgtttttaaaagtagactcatgaaact 791
Query: 592 gaaaggaaatagggtggaacanaangtggtggtgg 626
||||||||||||||||||||| || ||||||||||
Sbjct: 792 gaaaggaaatagggtggaacagaaggtggtggtgg 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
