XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGGTT
TTCCGGAAAAAAAAAATCTTAGAATTGCAATTTTAAAAAGATTACTAAGT
AAAGCTGCACTTGATTATGACGTAGAATTTTGAGTTGTTACTAACGCACA
GGCGTGGAATTGTTATGTCAGACTGAATTCACACCGTGAGGTTGAGAGAC
ATCAAAGCAGGTTAAGACTAGGACTAGCTTAGAAATCCCGAATTGCAATC
CTCTTCCTGCTGTCCCCAGCGGGCACATACTTCACATGTGCTTCTTTCTA
TAAGCTTCAAGTTGCTAAGTTTTATATTCCATCAATATTGCTATTTTAAT
CTTCTTGAGTAAGAAATGTGTTGGTGTTTTTCTTAAAAACAAACAAACAA
CTAAGTAAGGCCATGTAAAGTGCTTGAAACTGAAACTCAGTGCAGTGACT
CTTCCTTTCATTATTTGTGTACTGTAAATCAACTTGAAAAGATGGTCCTG
ATTCTTTATAAGATATACTATAAAGACAACCTACATGGAAATACACACAT
ACATAGATACACACACAGACATACACACACACACACACACATACACACAC
ACACACACACTCACTCACACACACTCACACCCCCTCTGTAGGTTTTTAAA
GATGACATATGATTACTTTTAAATGTGTTTAAAATATCTCAAAAAAGACT
GAGTTCTTTTTCTAAATAAACAATTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAACCAACCCACTCCCTGCACTGTTCCTTTTTTTTT
TTTTATTTTGGATGTTTTATTTATTTACATTTCAAATGTGATCCCCTTTC
TCGGTTTTCATTCTGGAAACCCTCTATCCCACCCCCTCACCTGCTTCTAT
GAGGGTGCTCCCCTACTCACCCACCAACTCATGCTTCTCTGCCCTGGCAT
TGCCTACACTGGAGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTTTTCTCTCTTCCTTCTTTTTCTCCCTTCTTTTTTTGTATTT
TTTATGTTAAAAACCTGATTTCCACTCTTTTCTATTCCTTATCTTCCCTT
TTTTTTACTTCTCTTTTTTTCTTTTCTCCTTTCTTTACACCTTTCACCCT
TTTTTATATTCTCTCTTTCCTCTTATTTCTTTCACATATTTCTTTCGTTT
TTTCTTCCCTTCTTCATTTCCTTATATTTTCCCTCTTTTCCTTCCCTATT
CCCTTTTTTTCTCCCCTTTTTTTTATTTATCCATTTTCCTTTTTTTTTCC
TCTCTTTTCTCTACTTAATTTATCCTCATATTCTACTATTAACTTTTTTA
TCCCCTTTTCTATCTTTCCACTATTTTCTCACTCGTACTATCTCGTCATT
TTTCCGCGCCTTCCCACTTTTTTATATTATACTTTTCTTACTCCAATATC
TCTAATTTTACCCATATTACTTCTTCCATTAACCACCCTATTTACCCATA
CATCCATTACCTATTCATATTTCTCTCCACTTATCTTACCGCTTTTATTC
TTTTN

Query= MSMg01no494_e09.b1 MSMg01no494_e09.b1 CHROMAT_FILE:
MSMg01no494_e09.b1 PHD_FILE: MSMg01no494_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:05 2005
         (529 letters)



>mm_chr8_52052745_52053673
          Length = 929

 Score =  963 bits (498), Expect = 0.0
 Identities = 519/526 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   aaaaaaaaatcttagaattgcaattttaaaaagattactaagtaaagctgcacttgatta 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaaaaaaaatcttagaattgcaattttaaaaagattactaagtaaagctgcacttgatta 263

                                                                       
Query: 64  tgacgtagaattttgagttgttactaacgcacaggcgtggaattgttatgtcagactgaa 123
           ||||||||||||||||||||||||||| |||||||||||||| | | |||||||||||||
Sbjct: 264 tgacgtagaattttgagttgttactaatgcacaggcgtggaactctcatgtcagactgaa 323

                                                                       
Query: 124 ttcacaccgtgaggttgagagacatcaaagcaggttaagactaggactagcttagaaatc 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcacaccgtggggttgagagacatcaaagcaggttaagactaggactagcttagaaatc 383

                                                                       
Query: 184 ccgaattgcaatcctcttcctgctgtccccagcgggcacatacttcacatgtgcttcttt 243
           |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 384 ccgaattgcaatcctcttcctgctgtccccagcgggcacatacttcccatctgcttcttt 443

                                                                       
Query: 244 ctataagcttcaagttgctaagttttatattccatcaatattgctattttaatcttcttg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctataagcttcaagttgctaagttttatattccatcaatattgctattttaatcttcttg 503

                                                                       
Query: 304 agtaagaaatgtgttggtgtttttcttaaaaacaaacaaacaactaagtaaggccatgta 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtaagaaatgtgttggtgtttttcttaaaaacaaacaaacaactaagtaaggccatgta 563

                                                                       
Query: 364 aagtgcttgaaactgaaactcagtgcagtgactcttcctttcattatttgtgtactgtaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagtgcttgaaactgaaactcagtgcagtgactcttcctttcattatttgtgtactgtaa 623

                                                                       
Query: 424 atcaacttgaaaagatggtcctgattctttataagatatactataaagacaacctacatg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcaacttgaaaagatggtcctgattctttataagatatactataaagacaacctacatg 683

                                                         
Query: 484 gaaatacacacatacatagatacacacacagacatacacacacaca 529
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaaatacacacatacatagatacacacacagacatacacacacaca 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)