Query= MSMg01no495_l21.b1 MSMg01no495_l21.b1 CHROMAT_FILE:
MSMg01no495_l21.b1 PHD_FILE: MSMg01no495_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:52 2005
(490 letters)
>mm_chr8_74877906_74878795
Length = 890
Score = 948 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Plus
Query: 1 ccattcttatgtagcttgggaatgggctgctcactaacacaagcactctcagtggtgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccattcttatgtagcttgggaatgggctgctcactaacacaagcactctcagtggtgctg 260
Query: 61 tgggaaagggaaaaaaaaagctgccaaaatcttcctcctgtaggacatctggccttgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaaagggaaaaaaaaagctgccaaaatcttcctcctgtaggacatctggccttgcag 320
Query: 121 atggggtggagaggtcatgagtagttataaagatgatcattaacttagggagaggttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggggtggagaggtcatgagtagttataaagatgatcattaacttagggagaggttaaa 380
Query: 181 ggtgactggctggtgagtgggtgtcactggggcagcgggtaggctctgctgggagccgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgactggctggtgagtgggtgtcactggggcagcgggtaggctctgctgggagccgca 440
Query: 241 gggcagcgctggcaggaagtggcagggtggggcccgccaggatcccgctatctcaggcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcagcgctggcaggaagtggcagggtggggcccgccaggatcccgctatctcaggcaa 500
Query: 301 cccaatcactgacgcccacacagccgtttcctgagcttaaaaaaatctgtttctctcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccaatcactgacgcccacacagccgtttcctgagcttaaaaaaatctgtttctctcttt 560
Query: 361 gcaaatcaacaacttttacctagaaacttcagcggtgagttctgactgatctccatctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaaatcaacaacttttacctagaaacttcagcggtgagttctgactgatctccatctcc 620
Query: 421 gtccgttgaagaaaatacaccactgtttacctgagggaggcgtgtgctcactccaactgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtccgttgaagaaaatacaccactgtttacctgagggaggcgtgtgctcactccaactgg 680
Query: 481 cgtgtttcag 490
||||||||||
Sbjct: 681 cgtgtttcag 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_l21.g1 MSMg01no495_l21.g1 CHROMAT_FILE:
MSMg01no495_l21.g1 PHD_FILE: MSMg01no495_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:52 2005
(592 letters)
>mm_chr8_75114399_75115390
Length = 992
Score = 743 bits (384), Expect = 0.0
Identities = 396/400 (99%), Gaps = 2/400 (0%)
Strand = Plus / Minus
Query: 1 agctagtctgagctacttagcaagatcatgcatccaaactaaaagcaagaagagggttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agctagtctgagctacttagcaagatcatgcatccaaactaaaagcaagaagagggttcg 339
Query: 61 ggatgcaggtgcaggatgcaggtgcgggatgcaggtgcgggatgcaggtgtgggatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggatgcaggtgcaggatgcaggtgcgggatgcaggtgcgggatgcaggtgtgggatgcag 279
Query: 121 gtgtgggacgcacctgcttaaaatgtgtgagtccctaggttctagtcccagaaattcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtgtgggacgcacctgcttaaaatgtgtgagtccctaggttctagtcccagaaattcaag 219
Query: 181 aaaaggaggggaaaaagaggggcttgaggggtgtcttggtgattaagaacacactggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aaaaggaggggaaaaagaggggcttgaggggtgtcttggtgattaagaacacactggctg 159
Query: 241 ctcttgcatattatacctgggtttgattccaagaacctgtatggcagttctcacctgtct 300
|||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ctcttgca-aaga-acctgggtttgattccaagaacctgtatggcagttctcacctgtct 101
Query: 301 ataattccaattccagggcatcagatgccttttcctggcacacagatacaaatgcaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ataattccaattccagggcatcagatgccttttcctggcacacagatacaaatgcaggta 41
Query: 361 aaagcacccatataatttttaaattttattttaagaaaga 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aaagcacccatataatttttaaattttattttaagaaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
