NNNNNGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAGTTTATTTGTACATGAGTTGTAGAGCTAGGTATTTGA
ACTGAAAGCCTTGATCTATTAAGAGAATTTGTAAATTGAAGTACTGGTCT
GCTCAAGTTAGGTAAAACCTGTCATTTCTAGGGATATTGTTCATGTACCA
ATTTATAAAGCTCTATACCATAGCTTCATTATTGGTAATGTCAAAATAAA
ATACCTGTCAAATAACGATTTTCCCTGTGAACCATCACTCTAACAACCTG
ACCTTTTCTCTGGTAGACCGTAAGTATGTTGCCATTTGCTGTGTGATCTA
TGAGGTACAGCGGATCTAAAGGGAACAATACTGAACCAATGAAACCTTAG
AAGGCTGTATGCAAGCATGAGTTGATAAGAACATTGTGATCTCCGTTTAG
ATAAAATGAATGGTGTGTATATGAGCTTCTGTTTGCAAAGAAATACATAG
GATTGACATTTTCCTATGGATAAACTGCTAATTTAGCTTTAAAAAAAATC
CAAAGCCATTGAAAGTCATAAAAATGTCAATCACCTTTTAAAAAATTTAT
CGGTAATTCTCTCTGATGCCAAAGAGAGAGGGGGGAGGCGTTGTTAAGCC
TGAGAACGTTTATCTCGCTCTATGAAAGCAGCAATAATGTGGAAAACTTA
ACTTACATTTGCTCAGGGATTAGTATATCTGATCAAAGTCTA

TATTACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAATAGCCAAGATAGGA
ACCAAATTTCATATCTCTTACCAGAATAGACTGCAAATGTGGTACACATA
CACAATAGAAATTTATTCAGCTGTAGAGAAGAATGAAATTGTTACATTTG
CAGGATGATGGATAGATCTGGAGCTCATTATTTTAAACTCTCATCCCTCA
TCAAAGAATCTTCTCCTTTTTTCTGTGTGCAGCAGATTGAAACTATTCTA
GAAATCCACAGCTAGTCAGTATGCAAAGGTCAAGTGACTATGGGATGCCC
AACTCCAACTGCCATAGCATCTACAGTGCAACCCCTACCCCTACGTGCAC
AGGGACCATTGTGGAAGAAAAGCAGAAAGATATAAGAGTCACAGAATCAG
AATACCTCATACTAGATTGTGTCTCCTAAACATTGCAAGGAAGTCACACG
CACGAAATCTCAACAATATGGTTGAAATGCATAATGAAAATAGCAGTTGA
GGGCTGGAGAGATGGCTCAGTGATTAGGAGCACTGACTGCTCTATCAGAG
GTCCTGAGTTTAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTA
ATGGGATCTGATGCCCTCTTCTGCTGGATCTGAAGAGAGTGACAGTGTAC
TCATATACATAAAATANATAAATCTTAAAAAAAAAGAAAAAGAGAAG

Query= MSMg01no496_f01.b1 MSMg01no496_f01.b1 CHROMAT_FILE:
MSMg01no496_f01.b1 PHD_FILE: MSMg01no496_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:36 2005
         (690 letters)



>mm_chr8_59495073_59496158
          Length = 1086

 Score = 1218 bits (630), Expect = 0.0
 Identities = 671/686 (97%), Gaps = 4/686 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtttatttgtacatgagttgtagagctaggtatttgaactgaaagccttgatc 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 gaattcagttgatttgtacatgagttgtagagctaggtatttgaactgaaagccttgatc 827

                                                                       
Query: 65  tattaagagaatttgtaaattgaagtactggtctgctcaagttaggtaaaacctgtcatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tattaagagaatttgtaaattgaagtactggtctgctcaagttaggtaaaacctgtcatt 767

                                                                       
Query: 125 tctagggatattgttcatgtaccaatttataaagctctataccatagcttcattattggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tctagggatattgttcatgtaccaatttataaagctctataccatagcttcattattggt 707

                                                                       
Query: 185 aatgtcaaaataaaatacctgtcaaataacgattttccctgtgaaccatcactctaacaa 244
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 706 aatgtcaaaataaaatacctgtcaaataaagattttccctgtgaaccatcactctagcaa 647

                                                                       
Query: 245 cctgaccttttctctggtagaccgtaagtatgttgccatttgctgtgtgatctatgaggt 304
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cctggccttttctctggtagaccgtaagtatgttgccatttgctgtgtgatctatgaggt 587

                                                                       
Query: 305 acagcggatctaaagggaacaatactgaaccaatgaaaccttagaaggctgtatgcaagc 364
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 acagcggacctaaagggaacaatactgaaccaatgaaaccttagaaggctgtatgcaagc 527

                                                                       
Query: 365 atgagttgataagaacattgtgatctccgtttagataaaatgaatggtgtgtatatgagc 424
           ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atgagttaataagaacactgtgatctccgtttagataaaatgaatggtgtgtatatgagc 467

                                                                       
Query: 425 ttctgtttgcaaagaaatacataggattgacattttcctatggataaactgctaatttag 484
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 466 ttctgtttgcaaagaaatacataggattgatattttcctatggataaactgctaatttag 407

                                                                       
Query: 485 ctttaaaaaaaatccaaagccattgaaagtcataaaaatgtcaatcaccttttaaaaaat 544
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ctt--aaaaaaatccaaagccattgaaagtcataaaaatgtcaatcaccttttaaaaaat 349

                                                                       
Query: 545 ttatcggtaattctctctgatgccaaagagagaggggggaggcgttgttaagcctgagaa 604
           ||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||
Sbjct: 348 ttatcggtaattctctctgatgccaaagagagaaggggg--gcgttgttaagcctgagaa 291

                                                                       
Query: 605 cgtttatctcgctctatgaaagcagcaataatgtggaaaacttaacttacatttgctcag 664
           ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 290 cgtttatctggctctatgaaagcagcaataatgtgggaaacttaacttacatttgctcag 231

                                     
Query: 665 ggattagtatatctgatcaaagtcta 690
           ||||||||||||||||||||||||||
Sbjct: 230 ggattagtatatctgatcaaagtcta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1086
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1076
Effective search space:   731680
Effective search space used:   731680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)