NNNTTGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTGCAGGA
GCGCGGAATTCCACTGGACTTCCAAAGAGGAGCTCATTCCATAATTCTTC
AAATTTCTCAACAAAACAGAAACAGAAGACACATTGCTCACTGCTTTTTA
TGAGGCCACATTTAGCCTGATACCTAAATTTCATAAAAACTAAGAGAAAG
AGAATTACAGACCAGTTTTCCCTGATGAGCACAGATGTACACTGTTTTCA
GTAAAACACCCAAAATTCTGATTCAAAGACACATAAAAAACATTGTAAAC
CATACTCAAGTTGATTTCATACCACAGATACAGATATGGTTGAAAATTGT
AATGTAATAAACATAACCTACTAAATAAACAAACAGAAAGACAAAAACCA
CATGATCATCTCCTTAGATTCAGCACAGCCTTTTATCAACATCAAACACT
ACTTCATGATAAAATTCATAGAAAGATTAGACTTTAAATGGACACACCTC
AACATAATAGCAGCAGTTTACATAAAGCTTATCACCACCATAAGCTGAAA
TGGGGAGAATCTCAAAGCAAGTTTGGAGAGAAAGTAGAAAATCCATTTTT
GATGGTAGACAACATAGTATTGTACATACATAACCTTGGAAAATCCACTA
CAAAAGTTCTACAACTGAGATACACTTTCTGCAGTATATTAATTTACCGA
AAATTTAGCAACCCTCTTGTATACTTGTTAGAAAAAGACCGAGATTTAAT
CCAAAAAACAACCGTTTCACAATTGCCTCAAATATCTT

TTTTTCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGACCATTTCTGAGCTCAAA
CTAGGGAGACTAAAGGGAACAAATATCGATTTAATAAATAGTTGAAACAT
AAAAAGAAGTATCACAAAGAGGCCAGATGATACATGTTCTAAAAGCAGAA
ATAAACAGAAAACCATCTCTGATACATATTGAAGACAGTGAAATGTGTTA
CAGCTGTGAATTCATGAAAACAGGTGGATGAAGTTTTGCATGGAATAAAT
TTTAACTAGTTTGGACTTGATCATCTCATACCCAGCAATTTTAAGATGTC
TCAATTTAGACTGGGAAAAATAACAACTATCCAAATAGTTTTTATTTAAA
GTAGCTATTTGGAGCTTTAAAAGTTAGAATTTCCTAACTATAACAGTTGT
GTTTCAAGCATGTTGATTATTTTATTATGCTCCTGATACTGGAATTTAAG
TTTTGAAAGGCACAGACAAAATAGAAATTCTAACTTCAGTCCCTGATGCT
TTCAAAACTAATGCTAGTTTTTCTTCTCTGAGTTGTTTGGTTTGGTGGGT
CTTCAGAGGATGAGATCAAAATGAGGGCTATAATTTGTTTCTGTGTTTCC
CATCCTTGGTACAGAATCTCAGTTTTGTTTTTTCAGATATAATGCCTAAA
TATCTCTCAAAATTATCCTTTTTCTTTTTAGTCCCAGCATTGGACTTTCC
TTTAAACTACTGAAATAACTTTGGACTAGTTTGCCTACATCTGAA

Query= MSMg01no498_o23.g1 MSMg01no498_o23.g1 CHROMAT_FILE:
MSMg01no498_o23.g1 PHD_FILE: MSMg01no498_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:11 2005
         (506 letters)



>mm_chr8_58065408_58066314
          Length = 907

 Score =  874 bits (452), Expect = 0.0
 Identities = 494/508 (97%), Gaps = 3/508 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttagaccatttctgagctcaaactagggagactaaagggaacaaatatcgatttaataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||
Sbjct: 707 ttagaccatttctgagctcaaactagggagactaaagggaacaaatatcaatcaaataaa 648

                                                                       
Query: 61  tagttgaaacataaaaagaagtatcacaaagaggccagatgatacatgttctaaaagcag 120
           |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 647 tagttgaagcatataaagaagtatcacaaagaggccagatgatatatgttctaaaagcag 588

                                                                       
Query: 121 aaataaacagaaaaccatctctgatacatattgaagacagtgaaatgtgttacagctgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aaataaacagaaaaccatctctgatacatattgaagacagtgaaatgtgttacagctgtg 528

                                                                       
Query: 181 aattcatgaaaacaggtggatgaagttttgcatggaataaattttaactagtttggactt 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 527 aattcatgaaaacaggtggatgaagttttgcatggaataaatttcaactagtttggactt 468

                                                                       
Query: 241 gatcatctcatacccagcaattttaagatgtctcaatttagactgggaaaaataacaact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gatcatctcatacccagcaattttaagatgtctcaatttagactgggaaaaataacaact 408

                                                                       
Query: 301 atccaaatagtttttattt-aaagtagctatttggagctttaaaagttagaatttcctaa 359
           ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 407 atccaaatagttttttttttaaagtagctatttggagctttaaaagttagaatttcataa 348

                                                                       
Query: 360 ctataacagttgtg-tttcaagcatgttgattattttattatgctcctgatactggaatt 418
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctataacagtt-tggtttcaagcatgttgattattttattatgctcctgatactggaatt 289

                                                                       
Query: 419 taagttttgaaaggcacagacaaaatagaaattctaacttcagtccctgatgctttcaaa 478
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 288 taagttttgaaaggcacagacaagatagaaattctaacttcagtccctgatgctttcaaa 229

                                       
Query: 479 actaatgctagtttttcttctctgagtt 506
           |||||||||||||||||||| |||||||
Sbjct: 228 actaatgctagtttttcttccctgagtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 907
Length adjustment: 10
Effective length of query: 496
Effective length of database: 897
Effective search space:   444912
Effective search space used:   444912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)