NNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGC
GCGGAATTCTCACCTGATGCATACCGAATGGCAGAGAAGCACCTGAAAAA
ATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCTTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGATTGCAGGCCTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC
TCAGAAAACTGGATATAGTACTACCGGAGAATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA
ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTTCTAGC
CAAATGGATGGACCTGGAGGCCATCATCCTGAGTGAGGTAACACATTCAC
AAAGGAACTCACACAATATGTACTCACTGAGTAGTGGATATTAGCCCAAA
ACCTAGGATATCCAAGACATAAGATACAATTTTTCTAACACATGAAACTC
AAGAAAAATGAAGACTGAAGTGTGGACTCTATGCCCCTCCTTAAAAGTGG
GAACAAACCACCTTTGGAAGGAGTACAGAAACAAATTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTAGACTAGCTGCAGACTGAGATTGTTTTTAAGGCAGAATAAACAA
CCAGAGAGCACACACTGGCTGATCCTAGGCCACAGCACATATATAGCAGA
GGATGGCTTAGGTGTGGCCTCAGTGGGAGAAGATGTGCCTAATCTTACAG
AGACCTGAGGCTTCAAGGAAGGGGATACCCCAGGCTGGGGGTCGGGGAAG
ATGAGCACCCTCTCTCTTGTAGCAAGGGGTACAGAATGGAGTGAAGAACT
GTGTGGGGGGAATGGGAGGGACTGCAGTGCCTGGAATGTAAATAAATAAA
ATAATTAATTAGAAAAGGCAGAATCAACCCAAAACAAAACCAAAAGGAAA
AATATACATAATCAGGCAGTCCTTGTAAATGTCTGATTGATAACCGTCTT
GGCTCTGGTTCTACAAGGGAGTCATTAGAAATTCTTAGAGACAAACTGGT
CCTCATGAGATAATTACTTTTGAGTTAGCCTGCAATCTCATTCTAATAGA
TGATTTTTCTCATCTGTGGAGTGGCCCGTACTGTGGGGATCTGATGTTTC
CAAAACCAAGGTGATTGGACTTTAGAAAACACTCCTCCGTTGGCCTCCAA
GGTAATGGGGGTTTTTTAAATCAGGGAACCTCACTTGGTTCCTTTTTTAT
TGCCAAAGTAGGGGGGGTCTTTCGGGGTGGTAAAACAGGATAGGGTGGGT
GTTTTTCACTTCTCTC

Query= MSMg01no498_p23.g1 MSMg01no498_p23.g1 CHROMAT_FILE:
MSMg01no498_p23.g1 PHD_FILE: MSMg01no498_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:16 2005
         (432 letters)



>mm_chr8_5539930_5540761
          Length = 832

 Score =  820 bits (424), Expect = 0.0
 Identities = 430/432 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagactagctgcagactgagattgtttttaaggcagaataaacaaccagagagcacacac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagactagctgcagactgagattgtttttaaggcagaataaacaaccagagagcacacac 260

                                                                       
Query: 61  tggctgatcctaggccacagcacatatatagcagaggatggcttaggtgtggcctcagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctgatcctaggccacagcacatatatagcagaggatggcttaggtgtggcctcagtg 320

                                                                       
Query: 121 ggagaagatgtgcctaatcttacagagacctgaggcttcaaggaaggggataccccaggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagaagatgtgcctaatcttacagagacctgaggcttcaaggaaggggataccccaggc 380

                                                                       
Query: 181 tgggggtcggggaagatgagcaccctctctcttgtagcaaggggtacagaatggagtgaa 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggggtcgggggagatgagcaccctctctcttgtagcaaggggtacagaatggagtgaa 440

                                                                       
Query: 241 gaactgtgtggggggaatgggagggactgcagtgcctggaatgtaaataaataaaataat 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaactgtgtgtggggaatgggagggactgcagtgcctggaatgtaaataaataaaataat 500

                                                                       
Query: 301 taattagaaaaggcagaatcaacccaaaacaaaaccaaaaggaaaaatatacataatcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taattagaaaaggcagaatcaacccaaaacaaaaccaaaaggaaaaatatacataatcag 560

                                                                       
Query: 361 gcagtccttgtaaatgtctgattgataaccgtcttggctctggttctacaagggagtcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagtccttgtaaatgtctgattgataaccgtcttggctctggttctacaagggagtcat 620

                       
Query: 421 tagaaattctta 432
           ||||||||||||
Sbjct: 621 tagaaattctta 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)