Query= MSMg01no501_l15.b1 MSMg01no501_l15.b1 CHROMAT_FILE:
MSMg01no501_l15.b1 PHD_FILE: MSMg01no501_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:36 2005
(322 letters)
>mm_chr8_115322846_115323569
Length = 724
Score = 576 bits (298), Expect = e-169
Identities = 317/324 (97%), Gaps = 2/324 (0%)
Strand = Plus / Minus
Query: 1 ttactaaatgcaacaagagttatggggtaaggaatcgaggggcaataagcaagaagagat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 524 ttactaaatgcaacaagagttatggggtaaggaatcgaggggcaatgagcaagaagagat 465
Query: 61 tgctgaaacaggcagaaaaaaatctatggagttt--taaaaaaaattagaatggtaattt 118
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 464 tgctgaaacaggcagaaaaaaatctatggagtttaaaaaaaaaaattagaatggtaattt 405
Query: 119 gagtttgccagtgtctttccctgaagagatttctaatactatgaattgtaaataaagcta 178
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gagtttgccagtgtctctccctgaagagatttctaatactatgaattgtaaataaagcta 345
Query: 179 ctgagtaattaaggccttgatttacctgaggccgactgctattttttagggtgataacag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctgagtaattaaggccttgatttacctgaggccgactgctattttttagggtgataacag 285
Query: 239 tataaagaaaaaaaaaacctgctgtttaagcaacatagtcgcaaagctgtggctgcctcg 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 284 tataaagaaaaaaaaaacctgctgtttaagcaacatagtcgcaaagctgtggctgccttg 225
Query: 299 tttttaatagccgagggtgacaga 322
| ||||||||||||||||||||||
Sbjct: 224 tgtttaatagccgagggtgacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 724
Length adjustment: 9
Effective length of query: 313
Effective length of database: 715
Effective search space: 223795
Effective search space used: 223795
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_l15.g1 MSMg01no501_l15.g1 CHROMAT_FILE:
MSMg01no501_l15.g1 PHD_FILE: MSMg01no501_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:36 2005
(624 letters)
>mm_chr8_115248768_115249791
Length = 1024
Score = 1145 bits (592), Expect = 0.0
Identities = 616/624 (98%)
Strand = Plus / Plus
Query: 1 tcgcaataaaagagatcaataatgacaagaggattctcatgtttgcctgtctgtttgttg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tcgcaataaaagagatcaataatgacaagaggattctcgtgtttgcctgtctgtttgttg 260
Query: 61 tgttgaatttcgacggttgctgctgtttaccttggctggagctggatcgatttatatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgaatttcgacggttgctgctgtttaccttggctggagctggatcgatttatatgca 320
Query: 121 gtctgagtctgctatgtaactatgtataacaggcctcctgtttctgatttatgacagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgagtctgctatgtaactatgtataacaggcctcctgtttctgatttatgacagtaa 380
Query: 181 catttcatagcttcttatgaattgccacaggcagtggtttcttaaacatcctggctttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttcatagcttcttatgaattgccacaggcagtggtttcttaaacatcctggctttta 440
Query: 241 tacatggcttgttcaattaatatttgaaaaagaaattagtgctgttgtaccttgctagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacatggcttgttcaattaatatttgaaaaagaaattagtgctgttgtaccttgctagaa 500
Query: 301 actttagaatcacttaggaaagtctttaagatcctgtgaaaaatttaaattcattaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actttagaatcacttaggaaagtctttaagatcctgtgaaaaatttaaattcattaactc 560
Query: 361 atgaattatcttggctgcatatatttttcagtactgaagatcaaacccaaagcattgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgaattatcttggctgcatatatttttcagtactgaagatcaaacccaaagcattgtgc 620
Query: 421 atactaggcaagcactgtgtcagtaagctgtatccctgccatgcttcaaatatatttcca 480
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 atactaggcaagcactgtgtcagtaaaatgtatccctgccatgcttcaaatatatttcca 680
Query: 481 agtcatctatgaacatctggcagcatatgtaagtcatcaagtcaaatagaaaacaaaagt 540
||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||
Sbjct: 681 agtcatctatgaacatctggcggcgtatgtaagtcatcaagtcaaacagaaaacaaaagt 740
Query: 541 acaattaagcttttcaatttttatcacataaacctcagttctacttctagataattcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaattaagcttttcaatttttatcacataaacctcagttctacttctagataattcaca 800
Query: 601 tgtctaatgatgctatggcatagc 624
| ||||||||| ||||||||||||
Sbjct: 801 tatctaatgatactatggcatagc 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
