Query= MSMg01no507_l08.b1 MSMg01no507_l08.b1 CHROMAT_FILE:
MSMg01no507_l08.b1 PHD_FILE: MSMg01no507_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:20 2005
(638 letters)
>mm_chr8_26347793_26348830
Length = 1038
Score = 1152 bits (596), Expect = 0.0
Identities = 629/642 (97%), Gaps = 7/642 (1%)
Strand = Plus / Plus
Query: 1 tctcaagagtccattttttctct-tttttttttttttcctcttgaaacagggtttctctg 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctcaagagtccattttttctctctttttttttttttcctcttgaaacagggtttctctg 259
Query: 60 tgtagccctggctgacctggaacttgttctgtagaccaggctggcctcaaactcacagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtagccctggctgacctggaacttgttctgtagaccaggctggcctcaaactcacagag 319
Query: 120 atctgtttgtctcggccttccaagtgctgggactaaagtcatgccccaccatgcctggtt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 atctgtttgtctcggccttccaagtgctgggactaaagtcatgccccaccatgcctggct 379
Query: 180 tcaaaaggggtctttaagtggtctttaaggggtctttaatggtctcacgtgtctgctaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcaaaaggggtctttaagtggtctttaaggggtctttaatggtctcacgtgtctgctaag 439
Query: 240 gctttt--ct-actgaggagagcccgtgcactctaatgagaccaaaagtcccagtcctga 296
||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gct---gcctcactgaggagagcccgtgcactctaatgagaccaaaagtcccagtcctga 496
Query: 297 gtatgaaacccagagctaaggcaagcctctaccactgactcatgccccccttaattgaag 356
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 497 gtatgaaacccagagctaaggcaagcctctaccactgactcatgtccttcttaattgaag 556
Query: 357 tgaagagaggctgttcctaagcaaacaccaaggttgaccgtcatttgcattagtcaattt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgaagagaggctgttcctaagcaaacaccaaggttgaccgtcatttgcattagtcaattt 616
Query: 417 tcggcaagtttggccatacgtagaagggacaggaggaaactccaggggaacaccaagaca 476
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 617 tcggcaagtttggccatacgtagaagggacaggaggaaactccaggggaacagcaagaca 676
Query: 477 ctagataatttaacaactgctgacataacaccccagcagctggactcacgtgtaccttca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctagataatttaacaactgctgacataacaccccagcagctggactcacgtgtaccttca 736
Query: 537 tttcttcaaatgctgccaatgagtaggttcactattcactttcaaactatgcagtaaacc 596
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tttcttcaaatgctgccattgagtaggttcactattcactttcaaactatgcagtaaacc 796
Query: 597 tggccaccgttggcaaagagcactcagcttccatccttggct 638
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tggccaccgttggcaaagagcactcagcttccatccttggct 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_l08.g1 MSMg01no507_l08.g1 CHROMAT_FILE:
MSMg01no507_l08.g1 PHD_FILE: MSMg01no507_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:21 2005
(343 letters)
>mm_chr8_26453281_26454023
Length = 743
Score = 586 bits (303), Expect = e-172
Identities = 333/343 (97%)
Strand = Plus / Minus
Query: 1 gaaatgaccaatgtggatgtaggctaggaagggatgctggccagcacctctagggggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gaaatgaccaatgtggatgtaggctaggaagggatgctggccagcacctctagggggcta 484
Query: 61 agccaagcagtcccagccctggcaggacccccgcggaccagtcaagctctctcttacagg 120
||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||||
Sbjct: 483 agccaagcagtcccagccctggcaggaaggctgtggaccagccaagctctctcttacagg 424
Query: 121 gccccatagaggcttctggaggcctccaggaagctagttgcactgtaccggctcttgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 423 gccccatagaggcttctggaggcctccaggaagctagttgcactgtaccggctcttgctg 364
Query: 181 tcttgtgggagctgcctggcatgagacccctcttgcctcagccagcatcagctaaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcttgtgggagctgcctggcatgagacccctcttgcctcagccagcatcagctaaggaga 304
Query: 241 ccctgcccctgaggaaacccttcttctgcagaactcctccctcccttggacgagacccct 300
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 303 ccctgcccctggggaaacccttcttctgcagaactcctccctcccttggatgagacccct 244
Query: 301 cccctaaggagacttctttcctggggagacctcctctgaggag 343
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tccctaaggagacttctttcctggggagacctcctctgaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
