Query= MSMg01no511_d21.b1 MSMg01no511_d21.b1 CHROMAT_FILE:
MSMg01no511_d21.b1 PHD_FILE: MSMg01no511_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:03 2005
(666 letters)
>mm_chr8_92607561_92608626
Length = 1066
Score = 1265 bits (654), Expect = 0.0
Identities = 660/662 (99%)
Strand = Plus / Minus
Query: 5 gaattcctggagtctgcgagattgaacacatcctttttccctacctgtgctggtttccag 64
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaattcctggaggctgtgagattgaacacatcctttttccctacctgtgctggtttccag 751
Query: 65 tgttctgtcacagcaaggaaagacttaacattgtcctggaaatgtcaagtcaccagtggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgttctgtcacagcaaggaaagacttaacattgtcctggaaatgtcaagtcaccagtggc 691
Query: 125 tcctgtgtatctctgtacatagcacagggttgtatgagagctgtgtataatatgttcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcctgtgtatctctgtacatagcacagggttgtatgagagctgtgtataatatgttcatg 631
Query: 185 ctgcaaacaagcttgtcacaaccaaatgctattttatatgactgaattagtgcatgttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ctgcaaacaagcttgtcacaaccaaatgctattttatatgactgaattagtgcatgttgt 571
Query: 245 ttcctcaacaaaatagtaactccctacagtttagggatttcttgctgcttcagcctcctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttcctcaacaaaatagtaactccctacagtttagggatttcttgctgcttcagcctcctg 511
Query: 305 tttttctacacaggatggagaggggtatttttactcttcatatttaccccccgttttctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttttctacacaggatggagaggggtatttttactcttcatatttaccccccgttttctc 451
Query: 365 ttttgtatagagcagctgtttttctcctgaaatgtcatacttggttctattcatgttaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttttgtatagagcagctgtttttctcctgaaatgtcatacttggttctattcatgttaga 391
Query: 425 taggtggatggcatctttaagttcatatctaacccaaacctagctaacaatatcattaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 taggtggatggcatctttaagttcatatctaacccaaacctagctaacaatatcattaca 331
Query: 485 gtctattagtaagtaaaatttatgcatgggtaaatggtccaggcttgaccaataagaatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtctattagtaagtaaaatttatgcatgggtaaatggtccaggcttgaccaataagaatg 271
Query: 545 cattctcggtctttctttgcaccattaggctgaagggaattttttcccacgtaagatgta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cattctcggtctttctttgcaccattaggctgaagggaattttttcccacgtaagatgta 211
Query: 605 gtgtggacattcacaaagaaactcacacaatatgtattcactgataagtggatattagcc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtgtggacattcacaaagaaactcacacaatatgtattcactgataagtggatattagcc 151
Query: 665 cc 666
||
Sbjct: 150 cc 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_d21.g1 MSMg01no511_d21.g1 CHROMAT_FILE:
MSMg01no511_d21.g1 PHD_FILE: MSMg01no511_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:03 2005
(401 letters)
>mm_chr8_92462643_92463443
Length = 801
Score = 754 bits (390), Expect = 0.0
Identities = 399/402 (99%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 1 tcttcc-aagcttttgttgctggaaactgcttgagcctactgcagacagtcacttcccac 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttccaaagcttttgttgctggaaactgcttgagcctactgcagacagtcacttcccac 260
Query: 60 tcagtggccccagccttggctcctagccacccactgcttccccataggacaattgcatcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagtggccccagccttggctcctagccacccactgcttccccataggacaattgcatcc 320
Query: 120 tgttgctggggcagccacccactgcattccaccacctgccactctgaggaagcagcagtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgctggggcagccacccactgcattccaccacctgccactctgaggaagcagcagtc 380
Query: 180 acagaagaggcccagtagcctgccttgaccagggttcccctggccctcagagagctataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaagaggcccagtagcctgccttgaccagggttcccctggccctcagagagctataa 440
Query: 240 ctctttggcattccagctgggacagagctccacagtttcctgcagacctgcaatatggag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctttggcattccagctgggacagagctccacagtttcctgcagacctgcaatatggag 500
Query: 300 gtcattaaatatggaaaaaattagcagtagttttaggttccaatacaggtaactaatctc 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gtcattaaatatggaaaaaattagcagtagttttaggttccaatagaggtaactaatctc 560
Query: 360 tgtgtgggaagaataatgtgaatggggttgtngggggtgaag 401
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 tgtgtgggaagaataatgtgaatggggttgt-gggggtgaag 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
