XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
TCTTTGCATGATTTTACCTTTGATGAGTATGAAGTGCCCCTCCTTGTCTT
TTTTGATTATTTTGGGTTGGAAGTCGATTTTGTTAGATATTAGAATGGCT
ACTCCAGCTTGTTTCTTCATACCATTTGCTTGGAAAATTGTTTTCCAGCC
TTTCATTCTGAGGTAGTGTCTATCTTTTNNTCTCTGGAGTAATGAATGTT
TCTCTGGTAAAGCCACGCAAAAATGTTGGGTCTTGTTTGTTGTAGCCCAG
TTTTTGTTAGGCCTATGGCCCTTTTTATATGGGGGAAAATGGGCGCTGTT
CCCTTTTTTTTTCTTCTCTTTTCCCCGATGATCCTCTCCTTTTTTAAACA
TATATTTCTTCTTTTCCATGGAAGTACTTTTCTTTTATTTTCTCATTTCT
ATTGATATGAGAGGGACGAGTTTTTATTTCTTACTTTTCCCCCGACTTTC
TATCATTTTTTTAACCCCTCTTTTCCCATTGTTTTACCTCTATCCCTATT
CACATTCTTTTCCCTTTTTGAATCTTTCCCCACAATTTCAAATAAATTCA
CTCCTATATTACCCCTATTGGCTATTTAACACCTCCCGCTCCTTTTTCCG
ACATTTCTCGTTATTCTTTCGCTTCCCTCCACTATCTCCCTTACCGATTT
TACTCGTTCTCCACCCTCTTTCCCTTTTTCCTATTATGAGATTGTTTTTT
ACCTTCTTCTTTTCCCCTTACTCTTTCTTCCGCTATTTTTTTCAATATCT
CATAN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCAGCTGTAAAAGAATCCAGATGTTCTA
AGATGATTTTGGGGGGATGCCAGATTTTTACAAAGACCTGCCAAGTCTTG
AAGTGTGCTCCTTAGGAACCATTCTGGAAGAGATGCTGGGAAGTGCCCCC
CCCACTCCCCCCCCAGCAAAATATTCGTGAGAAAGGGAGGAAGACAGAGT
TGGGTGGACAGAGGAGCTGAGCCTCAATGTAGTAGCCACTGAGGTCTCAG
CCAGTTCTACAGGAGCTGGGGAGGCTCCAAACTGTGAGGAGGGGGTCCTT
AGTACCACCTGTGTCAGCCTTACTCACTACAGGTTCTCATCTAAGACAGT
GGTTGGAGTTTTAACACAGCTCCTCCTGTTGTGAGGACTCTCAACCATAA
AATTATCTTGTTGCAGTTCTCTCGACAGCTGTCCCTCTTTATAAGTTGGC
ACTCCGTAAGGATGAAGCCATGTTCAGCTCGAGTGCCAAGACTGTTGAAG
CCAAATGGGGAGAAGCCGGATGAGTTCCAAGTCTGGCATCTCTCAGGTGC
TGCTCGAGCTGGAGATGAACGCAGATGTCTAGGTTCTGCTGCAGGAAGTC
AACATCACCACAACCCAGGAAAATTGAATTTGGTGGTGGTCGGAAAACTA
CCATAATTTTTGGACCAGTTCCTCAACTTTTAGTTN

Query= MSMg01no512_c06.g1 MSMg01no512_c06.g1 CHROMAT_FILE:
MSMg01no512_c06.g1 PHD_FILE: MSMg01no512_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:12 2005
         (543 letters)



>mm_chr8_19976012_19976953
          Length = 942

 Score =  884 bits (457), Expect = 0.0
 Identities = 531/571 (92%), Gaps = 29/571 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagctgtaaaagaatccagatgttctaagatgattttgggg-----------ggatgcc 49
           ||||||||||||||||||||||||||||||||||||| ||||           |||||||
Sbjct: 173 tcagctgtaaaagaatccagatgttctaagatgatttgggggggatgccaaaaggatgcc 232

                                                                       
Query: 50  agatttttacaaagacctgccaagtcttgaagtgtgctccttaggaaccattctggaaga 109
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 233 agatttttacaaagacctgccaagtcttgatgtgtgctccttaggaaccattctggaaga 292

                                                                       
Query: 110 gatgctgggaagtg---cccccc-ccactccc------------ccccc-agcaaaatat 152
           ||||||||||||||   |||||| ||||||||            ||||| ||||| ||||
Sbjct: 293 gatgctgggaagtgcacccccccgccactccccctccaccccctcccccaagcaagatat 352

                                                                       
Query: 153 tcgtgagaaagggaggaagacagagttgggtggacagaggagctgagcctcaatgtagta 212
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 353 tcgtgagaaagggaggaagacagagttgggtggacagaggagctgagcctcaatgttgta 412

                                                                       
Query: 213 gccactgaggtctcagccagttctacaggagctggggaggctccaaactgtgaggagggg 272
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gccactgaggtctaagccagttctacaggagctggggaggctccaaactgtgaggagggg 472

                                                                       
Query: 273 gtccttagtaccacctgtgtcagccttactcactacaggttctcatctaagacagtggtt 332
           |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 473 gtccttagtaccacctgtgtcagctttactcactacaggctctcatctaagacagtggtt 532

                                                                       
Query: 333 ggagttttaacacagctcctcctgttgtgaggactctcaaccataaaattatcttgttgc 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggagttttaacacagctcctcctgttgtgaggactctcaaccataaaattatcttgttgc 592

                                                                       
Query: 393 agttctctcgacagctgtccctctttataagttggcactccgtaaggatgaagccatgtt 452
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ggttctctcgacagctgtccctctttataagttggcactccgtaaggatgaagccatgtt 652

                                                                       
Query: 453 cagctcgagtgccaagactgttgaagccaaatggggagaagccggatgagttccaagtct 512
           |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cagctccagtgacaagactgt-gaagccaaatggggagaagccggatgagttccaagtct 711

                                          
Query: 513 ggcatctctcaggtgctgctcgagctggaga 543
           |||||||||||||||||||| ||||||||||
Sbjct: 712 ggcatctctcaggtgctgcttgagctggaga 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 942
Length adjustment: 10
Effective length of query: 533
Effective length of database: 932
Effective search space:   496756
Effective search space used:   496756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)