Query= MSMg01no512_h15.b1 MSMg01no512_h15.b1 CHROMAT_FILE:
MSMg01no512_h15.b1 PHD_FILE: MSMg01no512_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:38 2005
(652 letters)
>mm_chr8_6791070_6792121
Length = 1052
Score = 1199 bits (620), Expect = 0.0
Identities = 641/648 (98%)
Strand = Plus / Plus
Query: 5 gaattcttttgttcatttatctaggggtgaatgtatttacttcacctgttattgggaacc 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattcttttgttcatttatctaggggtgaatgtatttacttcacttgttattgggaacc 264
Query: 65 tgcatgaggcattttgatatttgttcatatttcctcaggaaagacatttatcactatgtt 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcatgaggcatattgatatttgttcatatttcctcaggaaagacatttatcactatgtt 324
Query: 125 ctttcatgatgagtttatactattcatcgggttgcatcgtacagtggtaagatcctcact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctttcatgatgagtttatactattcatcgggttgcatcgtacagtggtaagatcctcact 384
Query: 185 atcgttatgatagatctattttccttcacatttcatctcaaatacacacttctctccctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcgttatgatagatctattttccttcacatttcatctcaaatacacacttctctccctt 444
Query: 245 ccgatgatgcttagtctgaagggctaagcatatttttttgttgccaaataatgtgatgtt 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccgacgatgcttagtctgaagggctaagcatatttttttgttgccaaataatgtgatgtt 504
Query: 305 aggttttgtaaaagatgacactagagaagatcccagtgccatataaagagaaaacaacta 364
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 aggttttataaaagatgacactagggaagatcccagtgccatataaagagaaaacaacta 564
Query: 365 ccatagattttatgttatctgctacacagaatacctgagatatattacaagaacctcaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccatagattttatgttatctgctacacagaatacctgagatatattacaagaacctcaga 624
Query: 425 agttctccttttagcaatgctcatgtcttacattggtcatcattttgcatttttctccac 484
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 625 agttctccttttagcaatgctcatgtctcacattggccatcattttgcatttttctccac 684
Query: 485 accagttgtttatgtgttgctgatataaacagtctcctgtcatgggatttgaatcttaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 accagttgtttatgtgttgctgatataaacagtctcctgtcatgggatttgaatcttaac 744
Query: 545 cttgagaatattcagctcagctggatttttttttaatgttctagtattctttatactgcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttgagaatattcagctcagctggatttttttttaatgttctagtattctttatactgcc 804
Query: 605 ctcatctgtatcctatagagccttgcaccataccttctatatgtccca 652
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctcatctgtatcctatagagccttgcaccataccttctatatgtccca 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_h15.g1 MSMg01no512_h15.g1 CHROMAT_FILE:
MSMg01no512_h15.g1 PHD_FILE: MSMg01no512_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:38 2005
(607 letters)
>mm_chr8_6823572_6824578
Length = 1007
Score = 1158 bits (599), Expect = 0.0
Identities = 605/607 (99%)
Strand = Plus / Minus
Query: 1 acctatcacacacctatgatctttctaaggaagtgatggagaaatatcttcagagtcaga 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 acctctcacacacctatgatctttctaaggaagtgatggagaaatatcttcagagtcaga 748
Query: 61 ggttgagaatcccagccaccacttggagttagcattaaggactaaatagtctcacaatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ggttgagaatcccagccaccacttggagttagcattaaggactaaatagtctcacaatac 688
Query: 121 caagtttccaggaacttgcagagaacacctgctaatgggctttcctattttgaagccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caagtttccaggaacttgcagagaacacctgctaatgggctttcctattttgaagccttc 628
Query: 181 ccatcagtggcagtttaaatgtataattagttttcaaattttgtaatgttgcagcaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccatcagtggcagtttaaatgtataattagttttcaaattttgtaatgttgcagcaatta 568
Query: 241 ctgctcattgtgaaagctgttaattttatacatgaaaacaacttttaaggttttcaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgctcattgtgaaagctgttaattttatacatgaaaacaacttttaaggttttcaactg 508
Query: 301 attaaatgagtgggagaaaggattagtagataatataaaagttgtaaaactatgttagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 attaaatgagtgggagaaaggattagtagataatataaaagttgtaaaactatgttagct 448
Query: 361 aaagttcaggaatttttgaagcaagtggtgcctgcaaaattttaaactatgatgcagtag 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 447 aaagttcaggaatttttgaagcaagaggtgcctgcaaaattttaaactatgatgcagtag 388
Query: 421 tagaataaggattagagtagactgtgatggttggcatgatgaaattgccttttgagtcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tagaataaggattagagtagactgtgatggttggcatgatgaaattgccttttgagtcat 328
Query: 481 gattgtaattttaacctggaaacatcctaaaagctttgttgaatttttttcaaatttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gattgtaattttaacctggaaacatcctaaaagctttgttgaatttttttcaaatttcat 268
Query: 541 taatcctttgtacatttttttaagtcatgagttagtaaatgaaatattttggatatatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taatcctttgtacatttttttaagtcatgagttagtaaatgaaatattttggatatatta 208
Query: 601 aaaatta 607
|||||||
Sbjct: 207 aaaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
