Query= MSMg01no512_j06.b1 MSMg01no512_j06.b1 CHROMAT_FILE:
MSMg01no512_j06.b1 PHD_FILE: MSMg01no512_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:47 2005
(631 letters)
>mm_chr8_102734867_102735899
Length = 1033
Score = 1166 bits (603), Expect = 0.0
Identities = 622/629 (98%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 5 gaattctcccaatatcatcttaaggtactgtttggcttttgaaaacttctacttttgtat 64
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccaatgtcatcttaaggtattgtttggcttttgaaaacttctacttttgtat 264
Query: 65 ggacttaatatcccaaggacaatttaacttaagacaaacgtttgaaaacaatggatgtaa 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 ggacttaatatcccaaggacaatttaacttaagacaaatgtttgaaaacaatggatgtaa 324
Query: 125 gaagattcagctgccttgtgttgtgagtagaaaggccaagcagcaaaaggaatagtttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaagattcagctgccttgtgttgtgagtagaaaggccaagcagcaaaaggaatagtttca 384
Query: 185 ttccatgttgggaaaaggaattccctgaaataacaggttactaacaagtcaaaatggcaa 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 ttccatgttgggaaaaggaattccctgaaataacaggttattaacaagtcaaaatggcaa 444
Query: 245 gtagataatctatattttcctaaagtttcccccactgaatagttttgtgaatatatattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtagataatctatattttcctaaagtttcccccactgaatagttttgtgaatatatattc 504
Query: 305 catggtaaataatagcagaagaccgtatctgaattcaattttctcccacaaaaaaa--ta 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 catggtaaataatagcagaagaccgtatctgaattcaattttctcccacaaaaaaaaata 564
Query: 363 atgatcttatggattgagtgattatttatataacttacatttcattaacaaatgaggttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atgatcttatggattgagtgattatttatataacttacatttcattaacaaatgaggttg 624
Query: 423 cttaattttctcactactttaacaaaattgccattatgtgcaacttctgactcatagttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttaattttctcactactttaacaaaattgccattatgtgcaacttctgactcatagttt 684
Query: 483 agatgattcagtccatcttgctaggggagacatggtcactttagcagcatcaactggagt 542
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agatgattcagtcaatcttgctaggggagacatggtcactttagcagcatcaactggagt 744
Query: 543 ggtggaagcttacagtgaaatctctgcccatctgctgattatttgggttacaacaggaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggtggaagcttacagtgaaatctctgcccatctgctgattatttgggttacaacaggaga 804
Query: 603 caaataacgtgatcaaggcctgtctcttt 631
|||||||||||||||||||||||||||||
Sbjct: 805 caaataacgtgatcaaggcctgtctcttt 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1033
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1023
Effective search space: 635283
Effective search space used: 635283
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_j06.g1 MSMg01no512_j06.g1 CHROMAT_FILE:
MSMg01no512_j06.g1 PHD_FILE: MSMg01no512_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:47 2005
(495 letters)
>mm_chr8_102917645_102918538
Length = 894
Score = 919 bits (475), Expect = 0.0
Identities = 490/495 (98%), Gaps = 1/495 (0%)
Strand = Plus / Minus
Query: 1 atttatgattaacagttgtgatttctgaagaaagctaaactgttattcataattaactac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atttatgattaacagttgtgatttctgaagaaagctaaactgttattcataattaactac 635
Query: 61 atctataggtgttgaatatttttctcattctcctagcctatgtaatttccatgtgggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 atctataggtgttgaatatttttctcattctcctagcctatgtaatttccatgtgggctc 575
Query: 121 aagatcagcatgatggattctttatcactttagtgaacttccaaacttcaatctaaggtt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 574 aagatcagcatgatggattctttgtcactttagtgaacttccaaacttcaatctaaggtt 515
Query: 181 gttggcttttatcttagcaatggggctagcttgttaattaaatgcacacatcttgaatat 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gttggcctttatcttagcaatggggctagcttgttaattaaatgcacacatcttgaatat 455
Query: 241 tagggatttctcatgatgatgaacacaacagtagacagtgcttatacatttaagtaactt 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tagggatttctcatgatggtgaacacaacagtagacagtgcttatacatttaagtaactt 395
Query: 301 cccttgacttttactgaaaatattacagtacatatgtatatatttaacatatctatgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cccttgacttttactgaaaatattacagtacatatgtatatatttaacatatctatgaca 335
Query: 361 aacaacatctaaactcaatctcaaagcatgcagatatgctgctgtccaacaaagttctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aacaacatctaaactcaatctcaaagcatgcagatatgctgctgtccaacaaagttctgt 275
Query: 421 gatctatgatactcaattcttcagagttacagtttgcaccaataaagggaagtgtcctgc 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 274 gatctatgatactcaattctacagagttacagtttgcaccaataaagggaagtgt-ctgc 216
Query: 481 tttactttctttctg 495
|||||||||||||||
Sbjct: 215 tttactttctttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
