XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATTTGGTTCTCCAGA
GTCTTAACTTCTTGAGTTCTTTGTGTATATTGGATATTAGCCCTCTATCC
GATGTAGGATTGGTAAATATCTTTTACCAATCAGTTGGTTGCCATTTTGT
CCTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGTAATTTTGAGGTCC
CATGTGCCAATTCTTGATCTTAGAGCAAAAGCTAATGGTGTTCTGTTCAG
GAAAATTTCCCCTGTGCCCATGTGCTCCAGGCTCTTTCCCACCTTCTTTT
CTATTAGTTTCAGTGTATCTGGTTTTATGTGGAGGTCTTTGATCCATGTG
GACTTTAGCTTTATACAAGGACACAAGAATGGATCAATTAGCATTCTTCT
GCATGCTAACCTCCAGTTGAACCATCACCATTTGTTGAAAATGTTGTCTT
TTTCCACTGGATGGTTTTAGCTCCTTTTTCAAGGATCAAATGACCATAGG
TGTATGAGTTCATTTCTGGGTCTTCAATTCTATTCCATTCATCTACCTGT
CTGTCACTGTAACAATGCTATGCAGTTTTGTTTTTTTTAATCACTATTGT
TCTGTAGTACAGCTTGAGGTCTGGGATGGTGCTTTTCCCCGAAGTTCTTT
TATTGTTGAGAATAATTTTCACCATTCTGGGCCTTTTGTTATCCCGAAGA
G

ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCAGCTGTAAAAGAATCCAGATGTTCTAAGA
TGATTTGGGGGGGATGCCAAAAGGATGCCAGATTTTTACAAAGACCTGCC
AAGTCTTGATGTGTGCTCCTTAGGAACCATTCTGGAAGAGATGCTGGGAA
GTGCACCCCCCCGCCACTCCCCCTCCACCCCCCCAAAGCAAGATATTCGT
GAGAAAGGGAGGAAGACAGAGTTGGGTGGACAGAGGAGCTGAGCCACAAT
GTTGTAGCCACTGAGGTCTAAGCCAGTTCTACAGGAGCTGGGGAGGCTCC
AAACTGTGAGGAGGGGGTCCTTAGTACCACCTGTGTCAGCTTTACTCACT
ACAGGCTCTCATCTAAGACAGTGGTTGGAGTTTTAACACAGCTCCTCCTG
TTGTGAGGACTCTCAACCATAATATTATCTTGTTGCGGTTCTCTCGACAG
CTGTCCCTCTTTATAAGTTGGCACTCCATAAGGATGAAGCCATGTTCAGC
TCCAGTGCCAAGACTGTGAAGCCAAATGGGGAGAAGCCGGATGAGTTCCT
AGTCTGGCATCTCTCATGTGCTGCTCGAGCTGGAGATGAACGCAGATGTC
AAGGCTCTGCTGCCGGAAGTCCACATCACCTCTACCTTGTTATTTGAATT
TGGTGGTGGTCGGAAAGTTACCATCAATTTTTGTCCAGTCTCTCCTCTG

Query= MSMg01no512_j08.g1 MSMg01no512_j08.g1 CHROMAT_FILE:
MSMg01no512_j08.g1 PHD_FILE: MSMg01no512_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:47 2005
         (480 letters)



>mm_chr8_19975987_19976866
          Length = 880

 Score =  888 bits (459), Expect = 0.0
 Identities = 476/483 (98%), Gaps = 3/483 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagctgtaaaagaatccagatgttctaagatgatttgggggggatgccaaaaggatgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tcagctgtaaaagaatccagatgttctaagatgatttgggggggatgccaaaaggatgcc 257

                                                                       
Query: 61  agatttttacaaagacctgccaagtcttgatgtgtgctccttaggaaccattctggaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agatttttacaaagacctgccaagtcttgatgtgtgctccttaggaaccattctggaaga 317

                                                                       
Query: 121 gatgctgggaagtgcacccccccgccactccccctccaccc---ccccaaagcaagatat 177
           |||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||
Sbjct: 318 gatgctgggaagtgcacccccccgccactccccctccaccccctcccccaagcaagatat 377

                                                                       
Query: 178 tcgtgagaaagggaggaagacagagttgggtggacagaggagctgagccacaatgttgta 237
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 378 tcgtgagaaagggaggaagacagagttgggtggacagaggagctgagcctcaatgttgta 437

                                                                       
Query: 238 gccactgaggtctaagccagttctacaggagctggggaggctccaaactgtgaggagggg 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gccactgaggtctaagccagttctacaggagctggggaggctccaaactgtgaggagggg 497

                                                                       
Query: 298 gtccttagtaccacctgtgtcagctttactcactacaggctctcatctaagacagtggtt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtccttagtaccacctgtgtcagctttactcactacaggctctcatctaagacagtggtt 557

                                                                       
Query: 358 ggagttttaacacagctcctcctgttgtgaggactctcaaccataatattatcttgttgc 417
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 558 ggagttttaacacagctcctcctgttgtgaggactctcaaccataaaattatcttgttgc 617

                                                                       
Query: 418 ggttctctcgacagctgtccctctttataagttggcactccataaggatgaagccatgtt 477
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 618 ggttctctcgacagctgtccctctttataagttggcactccgtaaggatgaagccatgtt 677

              
Query: 478 cag 480
           |||
Sbjct: 678 cag 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)