Query= MSMg01no513_b02.b1 MSMg01no513_b02.b1 CHROMAT_FILE:
MSMg01no513_b02.b1 PHD_FILE: MSMg01no513_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:26 2005
(639 letters)
>mm_chr8_78902635_78903672
Length = 1038
Score = 1123 bits (581), Expect = 0.0
Identities = 622/636 (97%), Gaps = 3/636 (0%)
Strand = Plus / Plus
Query: 5 gaattctagcattctgtgagcccaaaattaaatgttttcttttataagttgctttaatca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagcattctgtgagcccaaaattaaatgttttcttttataagttgctttaatca 264
Query: 65 agacgatagagaagtacctaaaacaggacccgaaatctacctgcaaggtcccaacattta 124
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agacaatagagaagtaactaaaacaggacccgaaatctacctgcaaggtcccaacattta 324
Query: 125 aggattcaaacatttttctagagattagatcctatgcacatggatcaaagaaattcagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 aggattcaaacatttttctagagattagatcctatgcacatggatcaaagaaattgagac 384
Query: 185 ttgtcttatctatgttactcttggttttgaagctcccaggctgataggcaaacattggaa 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtcttatctatgttacttttggttttgaagctcccaggctgataggcaaacattggaa 444
Query: 245 aaacaaagaggcaacagaactcacaccacaccatgaatcttgttttatccagcagccaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaacaaagaggcaacagaactcacaccacaccatgaatcttgttttatccagcagccaga 504
Query: 305 ccaagctattactattttgagttcatatcctagaagtcacctaagaattcaggacatata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 ccaagctattactattttgagttcatatcctagaagtcacctaagaattcaggacatgta 564
Query: 365 ttgatgccttgttttgctttgcttttacctgttcacattatattcttatatttctcattg 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 ttgatgccttgttttgctttgcttttacctgttcaaattatattcttatatttctcattg 624
Query: 425 acatttttatatgtcttgtttccatcacacaaaaaaaaatagaaactcaaaacatcatca 484
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 625 acatttttatatgtcttgtttccatcacacacaaaaaa-tagaaactcaaaacatcatca 683
Query: 485 tgacagtttgagtctagactatatatattcttctgacatttacttttagggtcaagcgct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgacagtttgagtctagactatatatattcttctgacatttacttttagggtcaagcgct 743
Query: 545 gtgcctganacagagatgtataatgacacttttcctttatttcaatggggtagcta-ata 603
|||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| | |||
Sbjct: 744 gtgcctgaaacagagatgtataatgacagttttcctttatttcaatggggaagc-agata 802
Query: 604 atacactgtgcatttaaataacagcacacacagaga 639
||||| ||||||||||||||||||||||||||||||
Sbjct: 803 atacagtgtgcatttaaataacagcacacacagaga 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1038
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1028
Effective search space: 646612
Effective search space used: 646612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_b02.g1 MSMg01no513_b02.g1 CHROMAT_FILE:
MSMg01no513_b02.g1 PHD_FILE: MSMg01no513_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:27 2005
(622 letters)
>mm_chr8_79063915_79064937
Length = 1023
Score = 1083 bits (560), Expect = 0.0
Identities = 608/624 (97%), Gaps = 3/624 (0%)
Strand = Plus / Minus
Query: 1 acattgaacatccgatgtcacgtgacatctggtctgacactgg-tcttctcatcaggtca 59
|||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||
Sbjct: 823 acattgaacatccgatgtcacgagtcatctggtctgacactggct-ttctcatcaggtca 765
Query: 60 tctcaggataaggtgctactgagaaaacatagcagctgacgtgtttcaggggtttggctg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tctcaggataaggtgctactgagaaaacatagcagctgacgtgtttcaggggtttggctg 705
Query: 120 gcattccaaggtttatttgagttaatcttccttctcattggtctgtgaagctcactgaaa 179
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 704 gcattccaaggtttatttgagttaatcttccttttcattggtctgtgaagctcactgaaa 645
Query: 180 actcattctttcagggagcactttcactgtttcccacctctgctggtattagaaatacca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 actcattctttcagggagcactttcactgtttcccacctctgctggtattagaaatacca 585
Query: 240 gaagagtttcaaaacagaac-ctggagagtatttctctgagatgagaaagaactttttgt 298
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaagagtttcaaaacagaactctggagagtatttctctgagatgagaaagaactttttgt 525
Query: 299 aagaaggtacagagaataaagggctagaacgcacatttattgcttattggcgatggctgg 358
||||||| ||||||||||||| | |||||| |||||||||||||||||||||||||||||
Sbjct: 524 aagaaggcacagagaataaagagttagaactcacatttattgcttattggcgatggctgg 465
Query: 359 taactcgaggcttaggttttgtcatactcaggctgactgttgtgcagatgacctgttctt 418
|||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||
Sbjct: 464 taactcgaggcttaggttttgtcacactcaggctgactgttgtgcagatgacttgctctt 405
Query: 419 ggggattattcgggactcacactccctacagcaacctttaaatgattcctcctgactggc 478
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggggattattcgggactcgcactccctacagcaacctttaaatgattcctcctgactggc 345
Query: 479 tatggagatcgaggtactctaagatgaaatctatgctggaatgacaccatgaatctgcaa 538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 tatggagatcgaggtactctaaggtgaaatctatgctggaatgacaccatgaatctgcaa 285
Query: 539 acatatttgttgcatttttaaactcgatagatggtaattgagccaagaaagtgttagtcc 598
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acatatttgttgcattttaaaactcgatagatggtaattgagccaagaaagtgttagtcc 225
Query: 599 aaacagaaatcatcatattctacc 622
||||||||||||||||||||||||
Sbjct: 224 aaacagaaatcatcatattctacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1023
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1013
Effective search space: 619956
Effective search space used: 619956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
