XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAA
CAAAATATCGAGTGTTAATTTGTAAAATAAATAAATAACAACAAAAGCAA
TTAAAATAATAATAATGAAAGATAACTCTTGAGTAGAAAAATCCAAGGCC
AGTGATAGCTTTGAATTAAGATATTAGAATATCCAAAATATGAAAATTTA
AAATTTGCAATCTTTTAGAGAAATAGTTTCCCAACAGAAAAACCGCACCG
TACAAAGCATTGCTTCATGTATACAAGTGTTTAAAATACTTCATAAGTAA
TAACCTCCAGCTTATGTGTTTAAGACATATGGGAAAAGATGAGAATTTTA
GTTTCAGATACAATAGGATATGCCATGTTGTAGATATACAAAGAAAAATC
ACCCTTCTGATAAGGAATTCACAACCTGTAGGAACTAAAGTGTAAACTTT
AAAGAGGACTCAATGAACCAAGAGATCAATGTATTTTGTGTGCCTAAAGT
CAGAGCCATTCACCCTTCTGAGTAGCAGGTGTGTAAAATGCTTGCTAGGA
TCATGTGGTCTGATGCCTACAGAACTAGGAATCTGGGGCTTTAAAATGTT
TTCTCCTTTCTGTGATCTTTTATTCACCTTTAGTTCAATCACCTTCAATT
ATCAAACTAAGCCATCTTTTAAAAAAAAAGTCACAGCAAGTGCCTCTGAC
TTACTGTGTCACTGCTCAGTTAAGAGTTTGAATTCTTNAATGTGACAGTA
ATTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCAAGCTCAGGGTCTGCTCAAGGACTTTCTAGGA
CATTGGAACACTAGTGGAGGCTTAGCTATATGTCTAAATCAATCCTTAAT
GGCACTTAAAATAAAACAATACTGAAAGAGAGCACACAGATCCATACACC
AGATTAACATGGGGACAGGTTTTGAGTATATGTGCTATTGGAATGCCAAG
GTTCCAGGAGGCTAAATTTCCGTGAAACTCTTTGCCTCATGACTGCTTCC
AGGTTTCTAGGGCTGTCATATGAGTTACTACCGGAGTAGATGTGGCAGAT
GTCTAATTGAGGGACAGAAAAAGTGAAGAATCAGAGAAAGTTTTGACAGA
ATGAATCAGAGGTAGGATATGTCCAATACTCATTAGAAAAGCACAGGAAA
GATAAGTTACATTATAGCAGTACAGAAAGAGAGGGTGTGTATGGTAAATG
GAGTGGAGTAGGAGTTTTACAAAGATAGCTGGCTGACAGAACAGGCTAAA
CACAGGTAAAGACAGAGTGAGCTCAAGAGCGAGAAACAGACAGAAGATTA
GAACACATTGCCAGAGTTAGCATGAGGCTAAGCAAAGCAGTTCACTGAGA
AGCCAAGAAAGGCTGAATTGAATTAGTTATCTTAGAAGATTAAATGGTAT
GAGGCTAGAAGCTTTCTAGGGATAGTTAGAACAGAGAAAGAAATGCTCGG
AGTTCAGTCAAGTCATCTA

Query= MSMg01no514_f15.b1 MSMg01no514_f15.b1 CHROMAT_FILE:
MSMg01no514_f15.b1 PHD_FILE: MSMg01no514_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:13 2005
         (698 letters)



>mm_chr8_54027485_54028581
          Length = 1097

 Score = 1288 bits (666), Expect = 0.0
 Identities = 687/694 (98%), Gaps = 1/694 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaacaaaatatcgagtgttaatttgtaaaataaataaataacaacaaaagcaat 64
           ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattcttacaaaatatagagtgttaatttttaaaataaataaataacaacaaaagcaat 264

                                                                       
Query: 65  taaaataataataatgaaagataactcttgagtagaaaaatccaaggccagtgatagctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 taaaataataataatgaaagataactcttgagtagaaaaatccaaggtcagtgatagctt 324

                                                                       
Query: 125 tgaattaagatattagaatatccaaaatatgaaaatttaaaatttgcaatcttttagaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaattaagatattagaatatccaaaatatgaaaatttaaaatttgcaatcttttagaga 384

                                                                       
Query: 185 aatagtttcccaacagaaaaaccgcaccgtacaaagcattgcttcatgtatacaagtgtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatagtttcccaacagaaaaaccgcaccgtacaaagcattgcttcatgtatacaagtgtt 444

                                                                       
Query: 245 taaaatacttcataagtaataacctccagcttatgtgtttaagacatatgggaaaagatg 304
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 taaaatacttcataagtaataacctccagcttatgtgcttaagacatatgggaaaagatg 504

                                                                       
Query: 305 agaattttagtttcagatacaataggatatgccatgttgtagatatacaaagaaaaatca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaattttagtttcagatacaataggatatgccatgttgtagatatacaaagaaaaatca 564

                                                                       
Query: 365 cccttctgataaggaattcacaacctgtaggaactaaagtgtaaactttaaagaggactc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccttctgataaggaattcacaacctgtaggaactaaagtgtaaactttaaagaggactc 624

                                                                       
Query: 425 aatgaaccaagagatcaatgtattttgtgtgcctaaagtcagagccattcacccttctga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatgaaccaagagatcaatgtattttgtgtgcctaaagtcagagccattcacccttctga 684

                                                                       
Query: 485 gtagcaggtgtgtaaaatgcttgctaggatcatgtggtctgatgcctacagaactaggaa 544
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 685 gtagcaggtgtgtaaaatgcttgctaggatcatgtggtctgatgcccacagaactaggaa 744

                                                                       
Query: 545 tctggggctttaaaatgttttctcctttctgtgatcttttattcacctttagttcaatca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctggggctttaaaatgttttctcctttctgtgatcttttattcacctttagttcaatca 804

                                                                       
Query: 605 ccttcaattatcaaactaagccatcttttaaaaaaaaagtcacagcaagtgcctctgact 664
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 805 ccttcaattatcaaactaagccatcttttaaaaaaaa-gtcacagcaagtgcctctgact 863

                                             
Query: 665 tactgtgtcactgctcagttaagagtttgaattc 698
           ||||||||||||||||||||||||||||||||||
Sbjct: 864 tactgtgtcactgctcagttaagagtttgaattc 897


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1097
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1087
Effective search space:   747856
Effective search space used:   747856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)