NAAAGACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGAT
CCGCGGAATTCTTTGTTTATCTCTGAGCCCCATTATTTAATGGGGTTATT
TGATTTTCTGGATTCCACCTTCTTGAGTTTTTTATATATATTGGTTATTA
GTCCCTTATCTGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGT
GGCCTTTTTGTCTTATTGATGGTGTTTTTTTTTTTTTTTTTTTTTTTTTT
TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTATCAGTTCTCG
ATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTATTCCCCTGTG
TCCATATCTTTGAGGCTTTTCCCCACTTTCTGCTCTATAAGTTTCACTGG
CTCTGGGTTTCTGTGGAGTTCCTTGGTCCACTTAGATTTGACCTTAGTAC
AAGGAGATAGGAATGGATCAATTCACATTCTTCTACATGATAACTGCCAG
TTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTAGATGGT
TTTAGCTCCCTCGTCAAAGATCAAGTGACCATAGGTGTGTAGGTTCATTT
CTGGGGCTTTTGGTCTATTCCATTGGGCTACTTGGCTGGCAATATACCAG
TACCATGCATTTTTTATAACAATTACTCTGTAGTACAGCTTTAGGTTGGG
CATGGTGAGTCCCCCAGAGGTCATTTATCATTGAGAAGAGATTTGCTATC
CTAAGGTTTTTGTTATN

NNCCCCAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTTACCTAGATCTCAAGG
CTTTCGAAAGAAGACTTACTGAATATATTCATTGCTTGCAACCTGCCACT
GGACGTTGGAGAAGTAAGTTGCTGAATGCTTTCTAAGGGAAAATAAAGTG
TGGTTGATAGCTTTATTCCTAAGTAGGAACGACTCCCTTTCTTTAAAACT
TTTGACTAGTAAATCCTTGTTTTACTAAGCTATAAGATTTCTGAGTTTAG
ACAACTTTTTTTTTTTTTTTGGTTTTTTTTTTGTTGTTGTTGTTGTTGTT
GTTTTTCCAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCG
CTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCT
CCTGAGTGCTGGGATTAAAGGCGTGAGCCACCAAGCCTGGCTAGACAACT
TTTAAATGTATTACTTAGTGCTGTTGACAACGTATTACACAGAAGTACTT
AAGAAAATTATGAGCTGACAAGATAGCTCTGGTGTATGCCGTTCAAGCCT
ATATCCCTCAGTTGCATCTTCAGAAGCCATTTAAAGGGGAAGGAGAGGGC
AGACTCCACAAACTTCTCTTCTGACCTTCACATTTGTGCTGTGCTATGAC
ATGCATGCCTATATATTCCATGCAGCTTCACACACACCTTAAATAATTTT
TTTAAGAAAAAGAGATTATAAATGGCTACCCT

Query= MSMg01no515_e23.g1 MSMg01no515_e23.g1 CHROMAT_FILE:
MSMg01no515_e23.g1 PHD_FILE: MSMg01no515_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:34 2005
         (542 letters)



>mm_chr8_90643473_90644414
          Length = 942

 Score =  994 bits (514), Expect = 0.0
 Identities = 537/550 (97%), Gaps = 11/550 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttacctagatctcaaggctttcgaaagaagacttactgaatatattcattgcttgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tctttacctagatctcaaggctttcgaaagaagacttactgaatatattcattgcttgca 255

                                                                       
Query: 61  acctgccactggacgttggagaagtaagttgctgaatgctttctaagggaaaataaagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acctgccactggacgttggagaagtaagttgctgaatgctttctaagggaaaataaagtg 315

                                                                       
Query: 121 tggttgatagctttattcctaagtaggaacgactccctttctttaaaacttttgactagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tggttgatagctttattcctaagtaggaacgactccctttctttaaaacttttgactagt 375

                                                                       
Query: 181 aaatccttgttttactaagctataagatttctgagtttagacaacttttttttttttttt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  
Sbjct: 376 aaatccttgttttactaagctataagatttctgagtttagacaactttttttgttttt-- 433

                                                                       
Query: 241 ggttttt--tttttgttgttgttgttgttgttgtttttccagacagggtttctctgtata 298
            ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 -gtttttgttttttgttgttgttgttgttgttgtttttccagacagggtttctctgtata 492

                                                                       
Query: 299 gccctggctgtcctggaactcgctctgtagaccaggctggcctcgaactcagaaatccac 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gccctggctgtcctggaactcgctctgtagaccaggctggcctcgaactcagaaatccac 552

                                                                       
Query: 359 ctgcctctgcctc------ctgagtgctgggattaaaggcgtgagccaccaagcctggct 412
           |||||||||||||      |||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctgcctctgcctctgcctcctgagtgctgggattaaaggcgtgagccaccaagcctggct 612

                                                                       
Query: 413 agacaacttttaaatgtattacttagtgctgttgacaacgtattacacagaagtacttaa 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agacaacttttaaatgtattacttagtgctgttgacaacgtattacacagaagtacttaa 672

                                                                       
Query: 473 gaaaattatgagctgacaagatagctctggtgtatgccgttcaagcctatatccctcagt 532
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaaaattatgagctggcaagatagctctggtgtatgccgttcaagcctatatccctcagt 732

                     
Query: 533 tgcatcttca 542
           ||||||||||
Sbjct: 733 tgcatcttca 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space:   495824
Effective search space used:   495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)