Query= MSMg01no516_a21.b1 MSMg01no516_a21.b1 CHROMAT_FILE:
MSMg01no516_a21.b1 PHD_FILE: MSMg01no516_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:37 2005
(608 letters)
>mm_chr8_86896063_86897070
Length = 1008
Score = 1156 bits (598), Expect = 0.0
Identities = 604/606 (99%), Gaps = 2/606 (0%)
Strand = Plus / Plus
Query: 4 gaatt-accggggttctctggcttctctgttcctgtctctttgtggtcagatttctggaa 62
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaccggggttct-tggcttctctgttcctgtctctttgtggtcagatttctggaa 262
Query: 63 ctatgggaagcaccgtgggaacaacatgaagcagctagaatttgttctggctcacggttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctatgggaagcaccgtgggaacaacatgaagcagctagaatttgttctggctcacggttt 322
Query: 123 ctcagggctcagtccatggtcacttggttctgctgctttgggtctgtggcaaggtaccgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctcagggctcagtccatggtcacttggttctgctgctttgggtctgtggcaaggtaccgt 382
Query: 183 ctataaggtaagggcaatgcttaccaatcagggagtcacagtcaacccaactcatagcat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctataaggtaagggcaatgcttaccaatcagggagtcacagtcaacccaactcatagcat 442
Query: 243 cctgaagctagacaccagccaggtcaagggcgtctggtcagtacacaagctccccttcag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctgaagctagacaccagccaggtcaagggcgtctggtcagtacacaagctccccttcag 502
Query: 303 gctaaacccactggtgagttgacacccccagctgatgcggtggcacacagctgccatcct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gctaaacccactggtgagttgacacccccagctgatgcggtggcacacagctgccatcct 562
Query: 363 agtactttggagactgatggacagggtcacagtcagtctgagttacatagtgaggccccc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtactttggagactgatggacagggtcacagtcagtctgagttacatagtgaggccccc 622
Query: 423 atctcaaagaaaccaagagcttgggcatggtttgatggcagagtccctgcttagattact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atctcaaagaaaccaagagcttgggcatggtttgatggcagagtccctgcttagattact 682
Query: 483 caactgaggacccggggtacggcacgcaatagagcccctgtccaggatttcccagtgaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caactgaggacccggggtacggcacgcaatagagcccctgtccaggatttcccagtgaga 742
Query: 543 agctatggccatagcctagtaatagactagctggggggcaggggaggggggctgagcctg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agctatggccatagcctagtaatagactagctggggggcaggggaggggggctgagcctg 802
Query: 603 tggcca 608
||||||
Sbjct: 803 tggcca 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_a21.g1 MSMg01no516_a21.g1 CHROMAT_FILE:
MSMg01no516_a21.g1 PHD_FILE: MSMg01no516_a21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:37 2005
(582 letters)
>mm_chr8_87067116_87068097
Length = 982
Score = 1033 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Minus
Query: 49 atttggggccaagggatgatggctcagtcagtaagtgcttgtccccaaaccacaaagatc 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 atttggggccaagggatgatggctcagtcagtaagtgcttgtccccaaaccacaaagatc 923
Query: 109 caagttcaaccctaaaactcacaccaaacctggaccgagtggaggacacttgtaatccca 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 caagttcaaccctaaaactcacaccaaacctggaccgagtggaggacacttgtaatccca 863
Query: 169 gtgcttgtgacaggggactcactggccagccagcctaggctagtcagtgagcttcaggct 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gtgcttgtgacaggggactcactggccagccagcctaggctagtcagtgagcttcaggct 803
Query: 229 ggttgagaggtcagatctcatgtgagtgacacagcaggactcagtggcagggtgcacaca 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggttgagaggtcagatctcatgtgagtgacacagcaggactcagtggcagggtgcacaca 743
Query: 289 cctgcacacacgtggacgtatacacaccatatacattagacatttattttatgtaaatgg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cctgcacacacgtggacgtatacacaccatatacattagacatttattttatgtaaatgg 683
Query: 349 gatatagtaattttcaaatatttaaaaataagtttttattctcatgtggcatgtgtttat 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gatatagtaattttcaaatatttaaaaataagtttttattctcatgtggcatgtgtttat 623
Query: 409 gtttgtgtgtgcgcgagcatgccaggtgtgtacagatgctcgtgaggccagaagaagact 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtttgtgtgtgcgcgagcatgccaggtgtgtacagatgctcgtgaggccagaagaagact 563
Query: 469 agggttactggcggccatggcgacctggtgtgggtatgggaaatgaattcgggtccaccc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agggttactggcggccatggcgacctggtgtgggtatgggaaatgaattcgggtccaccc 503
Query: 529 tgtgctttaaaacctcaagcatctctgcaggccccaaacgtaatacgtgatgga 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgtgctttaaaacctcaagcatctctgcaggccccaaacgtaatacgtgatgga 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
