XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTCC
ACCTCCTCACTCCCTCTCTCTCCCTCTCTCCCTCTTTCTCTCCCTCCTCT
CTCTGAGTGTGAATGGAATTCTCTCTCTCTCTCTCTCTCCCCCTCCCCTC
CCTCCCTCTCCCTCTCCTACCCCCATCCCCCTCTCCCTCTCCCTCTCCCT
CTCCCTCTCCCTCTCCACTCCCTCTCCCTATTCCCTCTCTCTCTCTCTGG
GTGTGCAGGTATGAGTATGTATGTTGGTTTTTTTTTTTTTTTTTTTTTCC
TCTCATAGTCAGTCTGGTCAAAAAGGTGAGTTCAATGCCATCCAAGGCTG
CATTGTAAAACTTTTTTTTCCAAAATTTTATTAGATATTTTCTTCATTTA
CATTTCAAATGCTGTCCTGAAAGGCCCTTATACCCTCCCCCTGCCCTGGT
CCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGG
GGCATATAAAGTTTGCAAGACCAAGGGCCCTCTGTTTCCAATGATGGCCG
ACTAGGCCATCTTCTGCTACGTATACAGCTAGAGGTATGAGCTCTGGAGG
TACTGGTTAGTTCATATTGTTATTCCACCTATAGGATTGCAGACCCCTTT
CGCTCCCTGGGGAATTTCAATGGCTCCCCCATTGAGGGCCCTGGTTTCCT
CCAATAGAGGAGCGGGGGAAACCACTTTTGTATTTGCCAGGACTGGGCTA
GCCCTCAAAAAAAAAGGTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCATCTGTGGATTGCATTAAGCAGAAAGATGTCATG
ATATGGTAGTTAGCCTGAAGACAGGTTTTCCTTTACATCCTCATATTCCT
AGTGCCTGATACAGTAAGCCCTCAAAGAGGTGATAAATTTATAAACTTAT
ATCCAGATAATGATCAGGAATAAATCTTTCATTTGTGTGCAATCTCTTAT
GAATTACAGGGTTATGCACCTACATTTCCACACACCTCAGTCTATTCTCT
CATCTATGAAGTCAGCAAAGTAAGAGATTCTGCTGTTCTTGCACTTAGAT
TCTGATATACCTGTGAGATAACAGCTGTGATAACCCTCTAGAACCTAGAC
ACATGACAAAGAAAAGAGAGTTACATAGTACTTTTCCCCCCTGGATTATG
CTTATTCTTTGTGTTCTTCTGGTCATAGTTGTTCTCTTAACCCAGAGACC
ACAGCCAGCCAAATTGCATAAACAGCACTCATCTGTTCCCAAGGGGACCT
CTATTAATCACTCTCCAGTATTATTGACAAAAATACTCTTATGAATGGAA
GGATTTATTTTGGAATGGAAGGATTTATTTCACTGTTTCATAAGTCTCAT
TTTTGGATGTTTGGNTTTATGCACTTGGAATGAGCATCACGGCTACTACA
GAATATGGCATAGAAGCTTTCTAAACACAAAGAATACTGTTAGCCGAAAG
AGAAAGACTTAGAAACTAGGTAGAAN

Query= MSMg01no517_b17.g1 MSMg01no517_b17.g1 CHROMAT_FILE:
MSMg01no517_b17.g1 PHD_FILE: MSMg01no517_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:05 2005
         (572 letters)



>mm_chr8_40618927_40619898
          Length = 972

 Score = 1106 bits (572), Expect = 0.0
 Identities = 572/572 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   catctgtggattgcattaagcagaaagatgtcatgatatggtagttagcctgaagacagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 catctgtggattgcattaagcagaaagatgtcatgatatggtagttagcctgaagacagg 713

                                                                       
Query: 61  ttttcctttacatcctcatattcctagtgcctgatacagtaagccctcaaagaggtgata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ttttcctttacatcctcatattcctagtgcctgatacagtaagccctcaaagaggtgata 653

                                                                       
Query: 121 aatttataaacttatatccagataatgatcaggaataaatctttcatttgtgtgcaatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aatttataaacttatatccagataatgatcaggaataaatctttcatttgtgtgcaatct 593

                                                                       
Query: 181 cttatgaattacagggttatgcacctacatttccacacacctcagtctattctctcatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cttatgaattacagggttatgcacctacatttccacacacctcagtctattctctcatct 533

                                                                       
Query: 241 atgaagtcagcaaagtaagagattctgctgttcttgcacttagattctgatatacctgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atgaagtcagcaaagtaagagattctgctgttcttgcacttagattctgatatacctgtg 473

                                                                       
Query: 301 agataacagctgtgataaccctctagaacctagacacatgacaaagaaaagagagttaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 agataacagctgtgataaccctctagaacctagacacatgacaaagaaaagagagttaca 413

                                                                       
Query: 361 tagtacttttcccccctggattatgcttattctttgtgttcttctggtcatagttgttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tagtacttttcccccctggattatgcttattctttgtgttcttctggtcatagttgttct 353

                                                                       
Query: 421 cttaacccagagaccacagccagccaaattgcataaacagcactcatctgttcccaaggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cttaacccagagaccacagccagccaaattgcataaacagcactcatctgttcccaaggg 293

                                                                       
Query: 481 gacctctattaatcactctccagtattattgacaaaaatactcttatgaatggaaggatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gacctctattaatcactctccagtattattgacaaaaatactcttatgaatggaaggatt 233

                                           
Query: 541 tattttggaatggaaggatttatttcactgtt 572
           ||||||||||||||||||||||||||||||||
Sbjct: 232 tattttggaatggaaggatttatttcactgtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)