Query= MSMg01no518_l18.b1 MSMg01no518_l18.b1 CHROMAT_FILE:
MSMg01no518_l18.b1 PHD_FILE: MSMg01no518_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:13 2005
(392 letters)
>mm_chr8_120269103_120269894
Length = 792
Score = 725 bits (375), Expect = 0.0
Identities = 382/385 (99%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 5 gaattcagcagaagccacaaagaggaatgaatgtctggaaccatcacggaggattttgta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcagaagccacaaagaggaatgaatgtctggaaccatcacggaggattttgta 264
Query: 65 atataataaagactattttgagggggaaaaacaaaagagcctagggcaatggaaatggcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atataataaagactattttgagggggaaaaacaaaagagcctagggcaatggaaatggcc 324
Query: 125 tattctatacagtctgcatttggatcctcagtagccagccgtggcagcatgtacccagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattctatacagtctgcatttggatcctcagtagccagccgtggcagcatgtacccagaa 384
Query: 185 tcctagcactggagagatagaaacaggctcatacctgaagctcattggctagtcatccta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcctagcactggagagatagaaacaggctcatacctgaagctcattggctagtcatccta 444
Query: 245 gatgaatgagcaagctccagattcaaggagaccatgtctaaagaaataaggtggagagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgaatgagcaagctccagattcaaggagaccatgtctaaagaaataaggtggagagaa 504
Query: 305 agtgagaaagacacttagtgctgagctctggcttccataggtatacacgcttgtgtgtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtgagaaagacacttagtgctgagctctggcttccataggtatacacgcttgtgtgtgt 564
Query: 365 gtgtgtgg-gggnnggggggaggtt 388
|||||||| ||| |||||||||||
Sbjct: 565 gtgtgtggtggg--ggggggaggtt 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_l18.g1 MSMg01no518_l18.g1 CHROMAT_FILE:
MSMg01no518_l18.g1 PHD_FILE: MSMg01no518_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:13 2005
(624 letters)
>mm_chr8_120446438_120447461
Length = 1024
Score = 1207 bits (624), Expect = 0.0
Identities = 624/624 (100%)
Strand = Plus / Minus
Query: 1 agcagcgctcagctgtgccccatgacgaagtgaatgaagaatttaaaggcacccaaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 agcagcgctcagctgtgccccatgacgaagtgaatgaagaatttaaaggcacccaaaccc 922
Query: 61 catctctccctcccctctgatctctgttagtgtttcccattggccagaaacagtgaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 catctctccctcccctctgatctctgttagtgtttcccattggccagaaacagtgaggaa 862
Query: 121 ccaaggcaagagatccagcagacggatccaaagcggtatgtgtgagcctgccagcttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ccaaggcaagagatccagcagacggatccaaagcggtatgtgtgagcctgccagcttaat 802
Query: 181 gcggagtgcaaatcggagacatccaaaggggaaaggaaaccaagggacgtcccaggagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcggagtgcaaatcggagacatccaaaggggaaaggaaaccaagggacgtcccaggagct 742
Query: 241 tttatgcctgagaccgcgtctagcagaggaattaaaaaacttcttttgattgatgtgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttatgcctgagaccgcgtctagcagaggaattaaaaaacttcttttgattgatgtgctc 682
Query: 301 tatttcattgcaaaggctaccatactctgatactagcatactcagatgtcggagtagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatttcattgcaaaggctaccatactctgatactagcatactcagatgtcggagtagcct 622
Query: 361 cccccctggaaaacagaagccactttggagtgatcagagcgtcagagttgagcaagtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccccctggaaaacagaagccactttggagtgatcagagcgtcagagttgagcaagtctt 562
Query: 421 ttcagagcctctctggggcaacacataaacatcggtgctggcacttccagacaccatagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcagagcctctctggggcaacacataaacatcggtgctggcacttccagacaccatagt 502
Query: 481 cataagacaatgtcactttccacattgccaggtctctgccgtcgtgagccccacagacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cataagacaatgtcactttccacattgccaggtctctgccgtcgtgagccccacagacac 442
Query: 541 ctcgctccccactcctcagccacctgggggttctctgtgatcagttctccattcccctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcgctccccactcctcagccacctgggggttctctgtgatcagttctccattcccctat 382
Query: 601 tcggtgggtatcaatcctaatgaa 624
||||||||||||||||||||||||
Sbjct: 381 tcggtgggtatcaatcctaatgaa 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
