Query= MSMg01no521_o13.b1 MSMg01no521_o13.b1 CHROMAT_FILE:
MSMg01no521_o13.b1 PHD_FILE: MSMg01no521_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:22 2005
(561 letters)
>mm_chr8_64558361_64559321
Length = 961
Score = 1046 bits (541), Expect = 0.0
Identities = 556/561 (99%)
Strand = Plus / Plus
Query: 1 ggagtttatgttaacttagatatgatacagtggattgaaaatattaatgcatgcagacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggagtttatgttaacttagatatgatacagtggattgaaaatattaatgcatgcagacat 260
Query: 61 attcaatataccattatgaagagatagcaatgctcagacagctaatacaaaggtttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcaatataccattatgaagagatagcaatgctcagacagctaatacaaaggtttaata 320
Query: 121 cttgaactggttcctgagccaccagtctttctctaatcctaaatcaattgcttatttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgaactggttcctgagccaccagtctttctctaatcctaaatcaattgcttatttgat 380
Query: 181 atatcaataattttaaatgtattatattacaacaatcaaggtatatgataaaactgcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatcaataattttaaatgtattatattacaacaatcaaggtatatgataaaactgcata 440
Query: 241 tgcatatattttctagtgtctatgaacgcatagattatcttaaaatttttcctaaagtca 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tgcatatattttctagtgtctatgaacgcatagattatcttaaaaattttcctaaagtca 500
Query: 301 gaatttgactatatgatagtattgtacaacatatggatagaacatatgtaatatgtaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatttgactatatgatagtattgtacaacatatggatagaacatatgtaatatgtaagt 560
Query: 361 agatacataaaaatgagagaataaaaaaccacatgaataaatgagtgtggaaagagaaat 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 agatacataaaaatgagagaataaaaaaccacatgaataaatgagtatggaaagagaaat 620
Query: 421 agattttattatctgcaaagaatatttgttctcttcaagttgaagattacttgagcattc 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 agattttattatctgcaaagaatatttgttctcttcaagttgaagattacgtgagcattc 680
Query: 481 caaacctttgatttaatcttttagcatatttgatcactgtacttatcccatatgtatata 540
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 caaatctttgatttaatcttttagcatatttgatcactgcacttatcccatatgtatata 740
Query: 541 acatctcctttgtttctttac 561
|||||||||||||||||||||
Sbjct: 741 acatctcctttgtttctttac 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_o13.g1 MSMg01no521_o13.g1 CHROMAT_FILE:
MSMg01no521_o13.g1 PHD_FILE: MSMg01no521_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:22 2005
(673 letters)
>mm_chr8_64603511_64604582
Length = 1072
Score = 1205 bits (623), Expect = 0.0
Identities = 648/657 (98%), Gaps = 3/657 (0%)
Strand = Plus / Minus
Query: 1 aggtcaagtttgagcaataaatgctgacagagcatggtccaagaatggactcatgcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aggtcaagtttgagcaataaatgctgacagagcatggtccaagaatggactcatgcacag 595
Query: 61 agaattctgagtgcttatgagaaaactccaagtatgcgaaagtcttgtgactttattttt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 594 agaattctgagtgcttatgagaaaactccaagtatgcgagagtcttgtgactttattttt 535
Query: 121 ttcaatacagaattgttcgtaggatgtatttttgtgcttcttccaggtgtagcatatagg 180
||||||||||||||||| || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 534 ttcaatacagaattgtttgtgggatgtatttttgtgctcctcccaggtgtagcatatagg 475
Query: 181 aatcagtttacttcagatcattcattacaactggctgttgtttttatgcctttatggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aatcagtttacttcagatcattcattacaactggctgttgtttttatgcctttatggaaa 415
Query: 241 acatggttttttcccatgcagcctgcctaccatgtgtgatttgcccttgtgattgtacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 acatggttttttcccatgcagcctgcctaccatgtgtgatttgcccttgtgattgtacac 355
Query: 301 tctactcaggtgacttctcttaacccttggagtataaattctctgattctctgacatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tctactcaggtgacttctcttaacccttggagtataaattctctgattctctgacatgat 295
Query: 361 atccccattctcctagatcacaaaccctctacagtggtaaacaaaatgctttacctttga 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 294 atccccattctcctagatcacaaaccctctaca-tggtaaacaaaatgctttacctttga 236
Query: 421 gtcattttgctcctcctccagcccaagttctgtacctaaatgatttacagcaaaggtatt 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gtcattttgctccccctccagcccaagttctgtacctaaatgatttacagcaaaggtatt 176
Query: 481 aggaaactcaaggggaaaggaaaaaaatgtcttcaatggaaaaactaaatatacacaaat 540
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 175 aggaaactcaaggggaaagg--aaaaatgtcttcaatggaaaaactaaatatacacaaat 118
Query: 541 agaagaatgaaatcgaatggtttccgatattgaatgcaaatctctgagtccaactccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 agaagaatgaaatcgaatggtttccgatattgaatgcaaatctctgagtccaactccaga 58
Query: 601 tacagagaagaaaagtggggagaaagaagagaatgacgagaataaaaagtagaagga 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 tacagagaagaaaagtggggagaaagaagagaatgacgagaataaaaagtagaagga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1072
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1062
Effective search space: 704106
Effective search space used: 704106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
