TTCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAAGGCCTATACCTAAACATAATAAAAGCAATATACAGCAA
ACCAGTAGCCAACATCAAGCTAAATGGAGAGAAACTTGAAGCAATCCCAC
TAATATCAGGAACTAGGCAAGGCTGCCCACTCTCTCCCTAACTATTAAAT
ATAGTACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAA
AGGGATACAAATTGGAAAGGAAAGAGTTAAAATATCCCTATTTGCAGATG
ATCTGATAGTATACATAAGTGACCCCAAAATTCCACTAAAGAACTCCTAA
ACCTGATAAACAACTTTAGCAAAGTAGTTGGGTATAAAATTAAGTCAAAC
AAATCACTGGCCTTTCTCTGCCCAAAGGATAAACTTTCAGAGAAAGAAAT
TAGGGAAACAACACCCTTCACAGTAATCATAAATAATATAAAATACCTTG
GTGTGACTTTAACTAAGCAAGTGAAAGACCTGTATGATAAGAACTTCAAG
TCTCTGAAGAAAGAAATCAAAGATCTCAGAAGATAAAAAGATCTCCCATG
CTCTTGGGTTGGCAGGTTTAATATAGTCAAAATGGCTGTGTTGCCAAAAG
CAATCTACAGATTCAATGCAATCCCAATCAAAATTCCAACTCAAATCTTC
ACAGAGTTAGAAAGGGAGATTTGCAAATTCACCTGGAATAACAG

NNAACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTATTACATGTAAACCAAG
GTGCAATCATGCCCAATATGGATTTTCAAAAAGTAAATGTTCACCACTGA
ATCAAGATTTTGCTCCATTTTAGAAATGACATTGGAGAGCGAAAAGAAAA
TTGTCTGCAAATGAGCCTATTCTTGATACTCTTCTAATGAAAGGACGAGA
GATAAGTCTTTCTACCTGAGATGAATATAATATATGACGATCAAGCCAAT
TATTGCTGCTGGAGGATTCTGTCAACAAAATAGCTGAGCAGGAATGAGTG
TGATGATTTCTCTGGCAAGCTTGGAGAAATGATGAGTAATTTAAAGCACA
GAATTATTTCATCTAAGAAGTTCCATGACTTTGCGCTATTTGGCTAAATG
TGCTGAAAGGGAGGCAGAGATGATTAATGCCGCTGAATGGTGCTCAAAGA
GAAGGATGCTAAGAAGCCAATTTGAAGAGACAAAATTTCAGTTGATTGCT
TTTTTCTTAGAAGAGAGTGCTGAATATGCTATTTGGTATTTCAGACACTT
GGAGTAATTCTTCTCTTTAAAGCAAAACAAAGTTATATATAGATATAAGC
ATAGATATAGGTATGCATGTATATGTATATATACATATGTGTTATTTATA
TTTAGTACTCGCACCGTGTAAGTGTGACTGTGTGTATGTCATGG

Query= MSMg01no523_l08.g1 MSMg01no523_l08.g1 CHROMAT_FILE:
MSMg01no523_l08.g1 PHD_FILE: MSMg01no523_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:43 2005
         (664 letters)



>mm_chr8_103192870_103193933
          Length = 1064

 Score = 1274 bits (659), Expect = 0.0
 Identities = 662/663 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtattacatgtaaaccaaggtgcaatcatgcccaatatggattttcaaaaagtaaatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtattacatgtaaaccaaggtgcaatcatgcccaatatggattttcaaaaagtaaatgt 260

                                                                       
Query: 61  tcaccactgaatcaagattttgctccattttagaaatgacattggagagcgaaaagaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaccactgaatcaagattttgctccattttagaaatgacattggagagcgaaaagaaaa 320

                                                                       
Query: 121 ttgtctgcaaatgagcctattcttgatactcttctaatgaaaggacgagagataagtctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtctgcaaatgagcctattcttgatactcttctaatgaaaggacgagagataagtctt 380

                                                                       
Query: 181 tctacctgagatgaatataatatatgacgatcaagccaattattgctgctggaggattct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctacctgagatgaatataatatatgacgatcaagccaattattgctgctggaggattct 440

                                                                       
Query: 241 gtcaacaaaatagctgagcaggaatgagtgtgatgatttctctggcaagcttggagaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcaacaaaatagctgagcaggaatgagtgtgatgatttctctggcaagcttggagaaat 500

                                                                       
Query: 301 gatgagtaatttaaagcacagaattatttcatctaagaagttccatgactttgcgctatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgagtaatttaaagcacagaattatttcatctaagaagttccatgactttgcgctatt 560

                                                                       
Query: 361 tggctaaatgtgctgaaagggaggcagagatgattaatgccgctgaatggtgctcaaaga 420
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 tggctaaatgtgctgaaagggaggcagagatgattaatgccgttgaatggtgctcaaaga 620

                                                                       
Query: 421 gaaggatgctaagaagccaatttgaagagacaaaatttcagttgattgcttttttcttag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaggatgctaagaagccaatttgaagagacaaaatttcagttgattgcttttttcttag 680

                                                                       
Query: 481 aagagagtgctgaatatgctatttggtatttcagacacttggagtaattcttctctttaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagagagtgctgaatatgctatttggtatttcagacacttggagtaattcttctctttaa 740

                                                                       
Query: 541 agcaaaacaaagttatatatagatataagcatagatataggtatgcatgtatatgtatat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcaaaacaaagttatatatagatataagcatagatataggtatgcatgtatatgtatat 800

                                                                       
Query: 601 atacatatgtgttatttatatttagtactcgcaccgtgtaagtgtgactgtgtgtatgtc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atacatatgtgttatttatatttagtactcgcaccgtgtaagtgtgactgtgtgtatgtc 860

              
Query: 661 atg 663
           |||
Sbjct: 861 atg 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)