Query= MSMg01no526_c10.b1 MSMg01no526_c10.b1 CHROMAT_FILE:
MSMg01no526_c10.b1 PHD_FILE: MSMg01no526_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:59 2005
(606 letters)
>mm_chr8_118577848_118578851
Length = 1004
Score = 1035 bits (535), Expect = 0.0
Identities = 588/613 (95%), Gaps = 14/613 (2%)
Strand = Plus / Plus
Query: 1 aagttctgggggactgtttagagatggtcgctggagtttgttctcgtgtatgtgtggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttctgggggactgtttagagatggtcgctggagtttgttctcgtgtatgtgtggctg 260
Query: 61 agtgtcagtggatctctgcatgaaagtgtgcagtcatgaacacctgtgtaggtgactgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgtcagtggatctctgcatgaaagtgtgcagtcatgaacacctgtgtaggtgactgca 320
Query: 121 tgtatatattttaaatgcatatgataagcatattaactgtaagtatacagagtttgtaga 180
|||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||
Sbjct: 321 tgtatatattttaaatgcatatgacaagcatattaactgcaagtgtacagagtttataga 380
Query: 181 tgtattta-----ccaaaaagaaaagaaaagaaaatgtgggaatgtgtgagtgtatgtgt 235
|||||||| |||||| |||| |||||||||||||||||||||||||||||
Sbjct: 381 tgtatttacccccccaaaa-------aaaataaaatgtgggaatgtgtgagtgtatgtgt 433
Query: 236 gtcgtgaaaatagccacatgtgaggttttgcttttgtatttatttgtgtgcccatgtagg 295
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 434 gtcgtgaaaatagccacatgtgaggttttgcttttgtatttatttgtgtacccatgtagg 493
Query: 296 aatgttcatacgcatgtgggtgatgcaagaatgtttgtatgagtgagcatggaccatctg 355
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 494 aatgttcatacgcatgtgggttatgcaagaatgtttgtatgagtgagcatggacaatctg 553
Query: 356 tgtccatgagtgtgtatatactagtgtacagttgtacagatggcagtatgcaagcttgaa 415
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgcccatgagtgtgtatatactagtgtacagttgtacagatggcagtatgcaagcttgaa 613
Query: 416 tttttacatgtatgagcatgtgcttgtgactatctgtgcttacccatcagctgaaagggc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tttttacatgtatgagcatgtgcttgtgactatctgtgcttacccatcagctgaaagggc 673
Query: 476 agtattactcttattacaagttagttagaccctctacatgggaactctggctcaaaggca 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agtattactcttattacaagttagttagaccctctacatgggaactctggctcaaaggca 733
Query: 536 tggtgctctcatccctactatgacatctgtcttttggagtggtagacaccccccacacac 595
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 734 tggtgctctcattcctactatgacatctgccttttggagtggtagacaccccccacacac 793
Query: 596 acacac--ttggg 606
|||||| |||||
Sbjct: 794 acacacacttggg 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1004
Length adjustment: 10
Effective length of query: 596
Effective length of database: 994
Effective search space: 592424
Effective search space used: 592424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_c10.g1 MSMg01no526_c10.g1 CHROMAT_FILE:
MSMg01no526_c10.g1 PHD_FILE: MSMg01no526_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:59 2005
(549 letters)
>mm_chr8_118782087_118783036
Length = 950
Score = 1040 bits (538), Expect = 0.0
Identities = 547/550 (99%), Gaps = 1/550 (0%)
Strand = Plus / Minus
Query: 1 tttccttcttgctgacagtcttacctccttcagtcagcagaccctaaggctaaagctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tttccttcttgctgacagtcttacctccttcagtcagcagaccctaaggctaaagctgag 691
Query: 61 gcagaacattcaaggcacggaggagagagctctaagctttaggaagtgagaatgttctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gcagaacattcaaggcacggaggagagagctctaagctttaggaagtgagaatgttctga 631
Query: 121 ggacagagatagacatggactccgctgctctgctctccctttcagaaagctccatccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggacagagatagacatggactccgctgctctgctctccctttcagaaagctccatccttc 571
Query: 181 cctctccgtgattttgtgggagacaataactgcaactaaagcgaagtcggagctcagccc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cctcgccgtgattttgtgggagacaataactgcaactaaagcgaagtcggagctcagccc 511
Query: 241 tgctgctgtgtggtacaaaagaggatatccttgtgcctccagtgaactgcagatcctgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgctgctgtgtggtacaaaagaggatatccttgtgcctccagtgaactgcagatcctgta 451
Query: 301 tgggaaagaatttagtagtaggcatttaggatgtaaggcactaatgcagtgccagtaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgggaaagaatttagtagtaggcatttaggatgtaaggcactaatgcagtgccagtaagg 391
Query: 361 -aaaaaaaaaaaaactttgcaggcgtgcagaaacacttcagaattttttattaacctcaa 419
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 390 gaaaaaaaaaaaaactttgcaggcgtgcaaaaacacttcagaattttttattaacctcaa 331
Query: 420 ttgacatctagggatttgatggttatcttaaagaaagctggtttgaaagcccagccattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttgacatctagggatttgatggttatcttaaagaaagctggtttgaaagcccagccattt 271
Query: 480 gtatgtaaactttgcccattagcagagctaatggcttgaggacttgcctactaatctctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtatgtaaactttgcccattagcagagctaatggcttgaggacttgcctactaatctctc 211
Query: 540 actttcttct 549
||||||||||
Sbjct: 210 actttcttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
