Query= MSMg01no526_p15.b1 MSMg01no526_p15.b1 CHROMAT_FILE:
MSMg01no526_p15.b1 PHD_FILE: MSMg01no526_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:04 2005
(514 letters)
>mm_chr8_27718508_27719421
Length = 914
Score = 948 bits (490), Expect = 0.0
Identities = 505/510 (99%)
Strand = Plus / Plus
Query: 5 gaattcaagtttcacttttgccattaccagtcccatgatcttacacaagaatatcagctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagtttcacttttgccattaccagtcccatgatcttacacaagaatatcagctt 264
Query: 65 ccctgagttgtgattccttcatgtgaaaaatctttttttaaagctccaataaaaatccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccctgagttgtgattccttcatgtgaaaaatctttttttaaagctccaataaaaatccca 324
Query: 125 ctggttatgttcaattgctcacagagaaactggcacaggaagagtatctattttttgtcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctggttatgttcaattgctcacagagaaactggcacaggaagagtatctattttttgtcc 384
Query: 185 acgatcctacaaaattctatcgtttacattttgtcaagtcgatcccatttaaaagcaaag 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgatcctacaaaattctatcgtttacattttgtcaagtcgatcccatttaaaagcaaag 444
Query: 245 actaggtagatgctgagaggacacctgccttaaatctctgtataatggggttagtacccc 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 actaggtagatgctgagaggacacctgtcttaaatctctgtataatggggttagtacccc 504
Query: 305 aaagagggaaaaacttctccctatttgggaaattgtcccctatcactggtgtgttctgtg 364
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 505 aaagagggaaaaacttctccctatttgggaaattctcccctatcactggtgtgttctgtg 564
Query: 365 caatccacatttctaagacctgtacccaaagttttaccaaggtgagatgagtgtgtatct 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 caatccacatttctaagacctgtacccaaagttttaccaaggtgagatgagtgtgtgtct 624
Query: 425 aatccatgatcaggtacaaccactaggttttcagcaaaagctctcccttgccccgtgtag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatccatgatcaggtacaaccactaggttttcagcaaaagctctcccttgccccgtgtag 684
Query: 485 caatgaataaaaaatgcctaaactgctaga 514
|||||||||||||| |||||||||||||||
Sbjct: 685 caatgaataaaaaacgcctaaactgctaga 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_p15.g1 MSMg01no526_p15.g1 CHROMAT_FILE:
MSMg01no526_p15.g1 PHD_FILE: MSMg01no526_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:04 2005
(426 letters)
>mm_chr8_27874988_27875812
Length = 825
Score = 777 bits (402), Expect = 0.0
Identities = 420/426 (98%), Gaps = 1/426 (0%)
Strand = Plus / Minus
Query: 1 tctaggtctgagaagtcagaaaaataattcacacttttaaggcaagggagagtcttgaca 60
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 tctaggtttgagaagtcagaaaaa-aattcacacttttaaggcaagggagagtcttgaca 567
Query: 61 tgggggtatggctgctgaggtgttttctctcatttggctgattctggagcctgggtagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgggggtatggctgctgaggtgttttctctcatttggctgattctggagcctgggtagct 507
Query: 121 ttagtgaaactctccagaagtgtcctgatgaactctggatttcctgctgcattaggcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttagtgaaactctccagaagtgtcctgatgaactctggatttcctgctgcattaggcttt 447
Query: 181 tcaaatttccagggtcaccgagcccctctgctgataccgtcttcaacaccctctgcatct 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 446 tcaaatttccagggtcaccgagcccctctgctgataccttcttcaacaccctctgcatct 387
Query: 241 cccaggctcccacatgcagaccgtgtttaaactggagcagggacttagtggctcggtgtt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cccaggctcccacatgcaggccgtgtttaaactggagcagggacttagtggctcggtgtt 327
Query: 301 cactcatatgtgtgggatgcagccatgggctgccctcttcctccgcctttgcttccacct 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 326 cactcatatgtgtgggatgcagccatgggctgccctcttcctctgcctttgcttccacct 267
Query: 361 gaaggctactatatggactgttttgatttgtgactgtggtttgtagctgttgccgatttc 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 266 gaaggctactatatggactgttttgatttgtgactgtggtttgtagctgtcgccgatttc 207
Query: 421 tttgtt 426
||||||
Sbjct: 206 tttgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 825
Length adjustment: 9
Effective length of query: 417
Effective length of database: 816
Effective search space: 340272
Effective search space used: 340272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
