GGGAGGTCTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGTGTCTTTTGAGGAGGATGGAAACTATGTCTAATCACT
CTGGTTATTCTAGCTCTGTGTCTTTGTAAGATTTGCTCAGTGTCAGACCA
GGGCTTGGGAAGAAAAGATGAGGGCCAAGTGAGAAATTACAAAGAATCTT
AATTAACATCATTCAATTGCAAATGGGCATAATCCCAATTTAAAAAATAT
ATAAGTCAAGCCACCCCCCCCAAAAAGAGTATTATTTTTCTCACATAAGT
AAAGAAACAAAAACTAGATGTCCAGGCAGAGCAAAGCAAAACAGTATTTC
TAATTTCATACTGTGGGCTTTTATTTAAAAAGTGCTTTTATTTTTTAATT
CTTCATAAATTGTATACAATGTATTTTGAATGTATTCACCATCCCCCATC
TCCTCTCATAACAGCTTCTCCCTTCTCTACCCATACTATTTTGTGAACAT
ACTTTATTTTTTTTACCCATTAACACCAATTTGTGTGGTATCTTGGTTGA
GGCTCTACCAGACTACTACCCACTGAGTAGTAGAGCTAACAGAGATTATG
TGTTCTTTCAGCGTTCTGAGATTAGGGAATCCACATGACCAGGTTAAAGT
GTGGGACCTTTGCTTTGTTTACTAATGGCAGTCCTCTTGCTTGTGTCCTT
CAGGGGCAGAGAGCAAGGCAGACGATGAAAGGTAGG

NNNNNCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCTACGTGTAGAGTC
TTAAAAAAAATCAGTTACTGCCTTTGTTTGTTTTTAGTTTCCCAAGAAGA
ACCCTTAAGGGTCTACTTCAAACATTTTTAACCTACTTGTATTAGACTGT
CCCTCTGAGCTGAAACACTAGTTAATTGTGAAAAACAGGCACATTTATTT
TAATTCCAAAATTAATGGTCTTAAAGCTAAACAGTGGTTAGCAAATCTCA
AGATAAAACTGTCTCCCTGCCTCTCTCTAATTAATTATGCCCTACAGTAG
CCTTAGGAGAACAAGGGAAGCACCTTTTAAAATACCGTTCATGCAACCAC
TTTGAAGCCATCATCAGACACACTTGAGTATTTAAAAAATTTAATACACC
GGTAATATTTTTGTAACCATGTTTTTTTTGTTATTTTAAGCTTTGACTCC
CCTTCATCAAGTAATTAAGTTTCAACCTAAAATTTTCCTTTAAAATTATT
GCTTGTGGTGTTTATAAGATAGCTGGAAATTTTATAAAGTAAATAAAGGC
TTTTTTATGTTGGACACAGAATGTATGCAATAGAAAGTGTTTGTATACTG
TAGATATTAAAGGAGAGTTGTTTTAGCTTTGTTCATTTTTGTTTTTCCTA
ATTTGGTTGTATCTGGCTAGTTGGTGGGGTTGGTTTGGN

Query= MSMg01no527_a04.b1 MSMg01no527_a04.b1 CHROMAT_FILE:
MSMg01no527_a04.b1 PHD_FILE: MSMg01no527_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:07 2005
         (685 letters)



>mm_chr8_38110904_38111988
          Length = 1085

 Score = 1317 bits (681), Expect = 0.0
 Identities = 681/681 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtgtcttttgaggaggatggaaactatgtctaatcactctggttattctagct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgtcttttgaggaggatggaaactatgtctaatcactctggttattctagct 264

                                                                       
Query: 65  ctgtgtctttgtaagatttgctcagtgtcagaccagggcttgggaagaaaagatgagggc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtgtctttgtaagatttgctcagtgtcagaccagggcttgggaagaaaagatgagggc 324

                                                                       
Query: 125 caagtgagaaattacaaagaatcttaattaacatcattcaattgcaaatgggcataatcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caagtgagaaattacaaagaatcttaattaacatcattcaattgcaaatgggcataatcc 384

                                                                       
Query: 185 caatttaaaaaatatataagtcaagccaccccccccaaaaagagtattatttttctcaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caatttaaaaaatatataagtcaagccaccccccccaaaaagagtattatttttctcaca 444

                                                                       
Query: 245 taagtaaagaaacaaaaactagatgtccaggcagagcaaagcaaaacagtatttctaatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taagtaaagaaacaaaaactagatgtccaggcagagcaaagcaaaacagtatttctaatt 504

                                                                       
Query: 305 tcatactgtgggcttttatttaaaaagtgcttttattttttaattcttcataaattgtat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcatactgtgggcttttatttaaaaagtgcttttattttttaattcttcataaattgtat 564

                                                                       
Query: 365 acaatgtattttgaatgtattcaccatcccccatctcctctcataacagcttctcccttc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acaatgtattttgaatgtattcaccatcccccatctcctctcataacagcttctcccttc 624

                                                                       
Query: 425 tctacccatactattttgtgaacatactttattttttttacccattaacaccaatttgtg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctacccatactattttgtgaacatactttattttttttacccattaacaccaatttgtg 684

                                                                       
Query: 485 tggtatcttggttgaggctctaccagactactacccactgagtagtagagctaacagaga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggtatcttggttgaggctctaccagactactacccactgagtagtagagctaacagaga 744

                                                                       
Query: 545 ttatgtgttctttcagcgttctgagattagggaatccacatgaccaggttaaagtgtggg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttatgtgttctttcagcgttctgagattagggaatccacatgaccaggttaaagtgtggg 804

                                                                       
Query: 605 acctttgctttgtttactaatggcagtcctcttgcttgtgtccttcaggggcagagagca 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acctttgctttgtttactaatggcagtcctcttgcttgtgtccttcaggggcagagagca 864

                                
Query: 665 aggcagacgatgaaaggtagg 685
           |||||||||||||||||||||
Sbjct: 865 aggcagacgatgaaaggtagg 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no527_a04.g1 MSMg01no527_a04.g1 CHROMAT_FILE:
MSMg01no527_a04.g1 PHD_FILE: MSMg01no527_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:07 2005
         (617 letters)



>mm_chr8_38267520_38268536
          Length = 1017

 Score = 1193 bits (617), Expect = 0.0
 Identities = 617/617 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   attctacgtgtagagtcttaaaaaaaatcagttactgcctttgtttgtttttagtttccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 attctacgtgtagagtcttaaaaaaaatcagttactgcctttgtttgtttttagtttccc 758

                                                                       
Query: 61  aagaagaacccttaagggtctacttcaaacatttttaacctacttgtattagactgtccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aagaagaacccttaagggtctacttcaaacatttttaacctacttgtattagactgtccc 698

                                                                       
Query: 121 tctgagctgaaacactagttaattgtgaaaaacaggcacatttattttaattccaaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tctgagctgaaacactagttaattgtgaaaaacaggcacatttattttaattccaaaatt 638

                                                                       
Query: 181 aatggtcttaaagctaaacagtggttagcaaatctcaagataaaactgtctccctgcctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aatggtcttaaagctaaacagtggttagcaaatctcaagataaaactgtctccctgcctc 578

                                                                       
Query: 241 tctctaattaattatgccctacagtagccttaggagaacaagggaagcaccttttaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tctctaattaattatgccctacagtagccttaggagaacaagggaagcaccttttaaaat 518

                                                                       
Query: 301 accgttcatgcaaccactttgaagccatcatcagacacacttgagtatttaaaaaattta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 accgttcatgcaaccactttgaagccatcatcagacacacttgagtatttaaaaaattta 458

                                                                       
Query: 361 atacaccggtaatatttttgtaaccatgttttttttgttattttaagctttgactcccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atacaccggtaatatttttgtaaccatgttttttttgttattttaagctttgactcccct 398

                                                                       
Query: 421 tcatcaagtaattaagtttcaacctaaaattttcctttaaaattattgcttgtggtgttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcatcaagtaattaagtttcaacctaaaattttcctttaaaattattgcttgtggtgttt 338

                                                                       
Query: 481 ataagatagctggaaattttataaagtaaataaaggcttttttatgttggacacagaatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ataagatagctggaaattttataaagtaaataaaggcttttttatgttggacacagaatg 278

                                                                       
Query: 541 tatgcaatagaaagtgtttgtatactgtagatattaaaggagagttgttttagctttgtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatgcaatagaaagtgtttgtatactgtagatattaaaggagagttgttttagctttgtt 218

                            
Query: 601 catttttgtttttccta 617
           |||||||||||||||||
Sbjct: 217 catttttgtttttccta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)